Gene Taci_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTaci_1088 
Symbol 
ID8630936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermanaerovibrio acidaminovorans DSM 6589 
KingdomBacteria 
Replicon accessionNC_013522 
Strand- 
Start bp1146129 
End bp1146818 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_003317602 
Protein GI269792698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0254023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCTA GAGATAGGCT GGTTTTAGCC CTGGATCTGG AATGCCCCAG GGGCTGTCTT 
GAGCTACTGG ACCGGGTGGG GGATAGGATC GGTCGGGTGA AGGTGGGGCC CAGGATCTTC 
GCCCTGGGTG GGCTTGGGTT CATCCGGGAG CTGGTGGATG GGGGATACCG GGTCTTCCTG 
GACCTCAAGC TTCACGACAT CCCCAACACG GTGGCCCTGG CGGTGGAGGC CCTGGCGTCC 
CACCGGATAT GGGCCCTCAC GGTCCACGCC GCCGGGGGAT TTGAGATGAT GCGGCGGGCG 
GTGGAGTGCC GGGGGGACAT GGACATCCTG GCGGTTACGG TGCTCACCAG CCTGGGGGAG 
GATGCGTGGG CCCAGGTTTC CCCCGGGTGC CCCATGGGGG ACGCCATCGC GTCCCGGGCC 
CGGCTGGCCC ATAGGGCGGG GGTACAGGGG CTAGTGTGTA GCCCCCTGGA CCTGGAGATC 
GTGACCTCCG CCGCCCCGGG GCTTGCCACG GTGGTGCCCG GCATAAGGTT TCAGGGGGGA 
GAGGTCCACG ATCAGGCCCG GGTCATGGGT CCCCGGGAGG CGGTGGCTTC CGGGGCGTCG 
TTCCTGGTGG TGGGGCGCGC CATCCTGGAG AGCCCCGACC CGGCGGGGAC CATCGAGTCC 
ATGGTGGAGA TGATGGAGGT GGGGAACTGA
 
Protein sequence
MDARDRLVLA LDLECPRGCL ELLDRVGDRI GRVKVGPRIF ALGGLGFIRE LVDGGYRVFL 
DLKLHDIPNT VALAVEALAS HRIWALTVHA AGGFEMMRRA VECRGDMDIL AVTVLTSLGE 
DAWAQVSPGC PMGDAIASRA RLAHRAGVQG LVCSPLDLEI VTSAAPGLAT VVPGIRFQGG 
EVHDQARVMG PREAVASGAS FLVVGRAILE SPDPAGTIES MVEMMEVGN