Gene Taci_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTaci_0870 
Symbol 
ID8630707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermanaerovibrio acidaminovorans DSM 6589 
KingdomBacteria 
Replicon accessionNC_013522 
Strand
Start bp909131 
End bp910519 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content62% 
IMG OID 
ProductUDP-N-acetylmuramoylalanine/D-glutamate ligase 
Protein accessionYP_003317385 
Protein GI269792481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATCG GAGATTTGAG GGACAAGAGG GTATCCGTGA TAGGGGCGGG GATAAGCGGA 
GAGGCGCTCG CTAGGCTCGC CAGGGAGGCG GGCTGTCGGG TTTTCGTGTC CGACGGGGGT
AACGTGCCCA GGGAGAGGAT ATCCGCCCTG GAGAAGCTGG GTGTGGGTTT TGAGCTGGGG
GGGCACACCG ATAGGGTCTT CGAAGGGGAC CTCTTGGTCT TGAGCTCCGG CATCTCTCCC
TCCTCTCCGG TGGTGGAGAG GGCCCGGTCC ATGGGCATGC CCACCGTTGG GGAGGTGGAC
TTCGTCTTCC CTTTCCTTGG TTCCCCGGTT GTAGGCGTCA CGGGAAGCAA TGGCAAGACC
ACCACCACCT CCATTCTGGG ACACGTGCTT AACGCAGCTG GGGTCAGCAC CGCCGTGGCG
GGCAACATAG GAAATCCGTT GGGGTCGGTT CCCCTTTCCG GTGAGACCCC AAGCCTCGTG
GTGGCGGAGC TAAGCAGCTT CCAGTTGCAC TGGTGCGAGG AGGCTAGTTT CGCCGGCGGG
GTGGTGACCA ACCTGGCTCC GGATCACATC GACTGGCACG GGTCCTACGA GAACTACGTG
CTGGCAAAGA GGAGGCTGAT AGAGAGGACC GGGCCGGATG GGTTTGCAGT GGTTCAGCTG
GCGGACCTGG ATATCCTCCG AGGGGGTAGC GGTTCAGTTC GTCTATACCC CCTGTCCTGG
GACAAGGTTG AGCAGGGGGT ACACCTGGAC GATGCAGCCC AGGTGGCTCT CCTACTGATG
AACGGATCGG TCCGAGAGCT CTTCCGTTTC GATCAGGTGA GGCTGTTGGG GAGGCACAAC
CTGGAGAACG CCGCCATGGC CCTATGCGCT GCCAACCTGG TGCTTAACCG TCCGCTAAAT
GGGGAGGATG GCCGAATAGG GGAGTTCATG GCTCCCCCAC ATCGATGTGA GCTGGTGGGG
CGCTACGGAG GGGTCACGTT CGTTGACGAC TCCAAGGGGA CCAACGTGGC GGCCACGGTT
ACCGCCCTAA GGAGCCTCAA GTGCGACCCA GGGGGTACCA AGGTGATCCT TTTGGGTGGA
AGGGGCAAGG GGGAGGACTA CCAGGTCCTG GCTCAGACGG TATCGGAGGA GTGCTCCTAC
GCGGTACTGT ACGGGGAGGA GGGGGATAGG ATCGCGGAGG CCCTGTCCAA GGCGGGCTTC
AACCGGTGGA GCAGGGTGGG GAGCCTGGAC GAAGCGGTCC GGGTGGCGTT CCAGCGGACC
AAGGAGGGGG ACATGATCCT GCTCTCTCCC GCCTGCACCA GTTGGGATCA GTACCCCAAT
TACAAGGAGC GGGGGTATCA CTTTCGTAGG TTGGCACAGG AGGTCGGCGG CAGGGTGAGC
GAAAGGTGA
 
Protein sequence
MKIGDLRDKR VSVIGAGISG EALARLAREA GCRVFVSDGG NVPRERISAL EKLGVGFELG 
GHTDRVFEGD LLVLSSGISP SSPVVERARS MGMPTVGEVD FVFPFLGSPV VGVTGSNGKT
TTTSILGHVL NAAGVSTAVA GNIGNPLGSV PLSGETPSLV VAELSSFQLH WCEEASFAGG
VVTNLAPDHI DWHGSYENYV LAKRRLIERT GPDGFAVVQL ADLDILRGGS GSVRLYPLSW
DKVEQGVHLD DAAQVALLLM NGSVRELFRF DQVRLLGRHN LENAAMALCA ANLVLNRPLN
GEDGRIGEFM APPHRCELVG RYGGVTFVDD SKGTNVAATV TALRSLKCDP GGTKVILLGG
RGKGEDYQVL AQTVSEECSY AVLYGEEGDR IAEALSKAGF NRWSRVGSLD EAVRVAFQRT
KEGDMILLSP ACTSWDQYPN YKERGYHFRR LAQEVGGRVS ER