| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_0574 |
|---|
| Symbol | |
|---|
| ID | 8630387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | - |
|---|
| Start bp | 612748 |
|---|
| End bp | 614280 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003317092 |
|---|
| Protein GI | 269792188 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAGC TCATCCTCAC CATAGCCCTG CTCCTCTCCC TCGCATCCCT GGCCTTCGGG
GAGGAGAGGG TGCTCCGCTG GGCGGGCGAC TCCGAGGGGG GGGTCCCCTT CATGTTCAAC
GACCCAAATA ACGTGGACCG GCTCATAGGC TTCGAGGTGG ACATAATCGA GGCGGTGGCC
CGAGAGATGG GCCGCAAACC GGTCTTCGTC AACAACAGCT GGGACAACCT GATACCGGGG
CTCAACCGGC GGCTCTACGA CGTGGCCATA AACGGCCTGG AGGTTACGCC GGAACACGAA
CAGGAGGTGG CCTTCTCCAT CCCCTACTAC CACACCTACC TGCAGATAGC GGTCCGGAGG
GAGAACCGGG AAATAAGGTC CTTTGAGGAC CTGAAGGACA AGACGGTGGG GACCCTAAAG
CAGTCCTACG CCTACTTCAT GCTCAAGGAT CTGGGCTGCA GGGACATAAG GACATACATA
GTGGAGCCCA ACGCCTACGA CGACCTGATG AACGGGCGAC TGGACGCCAC CCTCTTCGAC
GCCCCCATAG CCATGTACTC CGCCGGGTTC AACCCGGGGG TCAAGTTCGT GGGCGAGCCG
GTGGGGTCCA TGACCTACGC CATAGCGGTC CGGAAGGAGG ACAGGGAGCT CCTCAAGGAG
ATAAACGCCG CCCTCATGAA GCTCCGGGAC TCGGGGGAGC TGCGGCGCAT ATACGACAAG
TGGAACCTAT GGAACCCGGT GATGGCCAAG GAGTGGAACG ATTTCTCCCC TCCCAAGTCG
CCCCCCTACG CCTACAACGA CTGGGCGGAG GCCCACAAGC CCCGGCTGTC CTTGGCGGAC
CGGGTGAGGC GCTACGTGAG CTTCCTCCCC ACCTTCGGCC AGGCGGCGAC GGTGACCCTG
AAGGTGTCCA TATGCGCCAT GTTGCTGGCC ATGGCGTTCG GGTTCGTGCT GGCCATCATG
AGGGTCTTCG GCCCCCGGTG GGCCTCCACC CTGGCGCTGG GATACATCGA GGCCATCCGG
GGGACCCCGG TGCTGATCCA GCTCTTCTTC ATCTTCTACG GGCTACCCAA CGTGGGGATC
AAGCTCTCCC CCTTCATGGC GGGGGTCATC GGGCTGGGGA TGAACTACGC CGCCTACGAG
GCGGAGAACT ACAGGGCGGG GCTCCTGGCG GTGCCAAGGG GACAGATGGA GGCGGCCCTG
GCCCTCTCCA TGACCCGCTG GCAGGCATTG AGGCACGTGG TGGTCCCCCA GGCGTTCCGG
GTGGTGATCC CCCCGGTCAC CAACGACTTT ATATCCCTGC TCAAGGACTC CTCCCTGGTC
TCCATAATAA CCATGGTGGA CCTCACCAAG GCCTACGGAC AGATCGCCGC CACCTACTAC
GACTACTTCG GAACCGGGAT CATGGTGGCC ATCATATACC TGCTCCTGGG GCTCCCATTC
GTGAGGCTGT CCAAGTGGGC GGAGAGGAAG TTCTCCATCC AGGATCGGGA GAAGCAACGT
CACCACGAAC AGATGATGAG AGGATGGAGA TGA
|
|---|
| Protein sequence | MRKLILTIAL LLSLASLAFG EERVLRWAGD SEGGVPFMFN DPNNVDRLIG FEVDIIEAVA
REMGRKPVFV NNSWDNLIPG LNRRLYDVAI NGLEVTPEHE QEVAFSIPYY HTYLQIAVRR
ENREIRSFED LKDKTVGTLK QSYAYFMLKD LGCRDIRTYI VEPNAYDDLM NGRLDATLFD
APIAMYSAGF NPGVKFVGEP VGSMTYAIAV RKEDRELLKE INAALMKLRD SGELRRIYDK
WNLWNPVMAK EWNDFSPPKS PPYAYNDWAE AHKPRLSLAD RVRRYVSFLP TFGQAATVTL
KVSICAMLLA MAFGFVLAIM RVFGPRWAST LALGYIEAIR GTPVLIQLFF IFYGLPNVGI
KLSPFMAGVI GLGMNYAAYE AENYRAGLLA VPRGQMEAAL ALSMTRWQAL RHVVVPQAFR
VVIPPVTNDF ISLLKDSSLV SIITMVDLTK AYGQIAATYY DYFGTGIMVA IIYLLLGLPF
VRLSKWAERK FSIQDREKQR HHEQMMRGWR
|
|---|
| |