| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_0171 |
|---|
| Symbol | |
|---|
| ID | 8629981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | + |
|---|
| Start bp | 191827 |
|---|
| End bp | 192984 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_003316693 |
|---|
| Protein GI | 269791789 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGATA AAATCGATCC TATAAGGGAC CTGTTGAATT ACCATCCGGA TATGTTGTTT
GTGCTGGATC GATCGGGCAG GATAGTTGAG GCCGGCGCGT CGGCTTTCGT GTTTTTGGGT
CTAATGCCCA ACGATATAAG GGGAACCAGC TTCGCCAACT TGTTGCCGCC GGACAGGAGG
GAGGAGTTCC TTCGCTTTAT ATCGCGACCC AGGATGCTTA GAATGAACCG TTACCCGATG
GTGAGGCACG ATGGTGTGGA GGTCACCATG GAGCTCCACG TGTCCAAGGG CTCCTGGGCG
GGAGAGGAGG CCATATACCT CACCGCCATA GACTTGTCGG AACGTGTCCG CTCCGAGGCT
CAGGTGGAGT TCTACATGGA GGAGATGGAG CGGATCGCCA TGAAGTTGCG GCAGACCCAG
CAGGCCCTGG ACGACCAGCT CCAGAAGGCG GCCAAGCTCC ATCGGAAGCT GATGCCCGCC
ATCCCTAAGA TGGAGGGCAT CGTGGGAGCC GGCTGTTTCG ATCCCGCCTC TCGCATAGGG
GGGGACTTTT ACGGGGTGGT TCCCCTGGGG GACCGGGCGC TGGCGTACCT GGTGGACGTG
AGCGGACACG GGCTGGATGG GGCCCTCATC TCCCTTTTCG TTAGGGACTG GGTGGCGGAG
TACCTTTCGG GCAGAACTCC CTCCCAGGTG GACCCCCTGA ACCTGCTTGA ACACATATCG
AGCCGTTTCC TTGGGGAGGA ACTCCTGTAC GATTACTTCA TCTGCCTCCA GATAGCCCTG
TTTGACCGAG GCAAGGGCAC GTTTCGCCTG GTCAACGCTG GCAACCCGGT GAGGCCCATG
CTGTTCACCC CTGAAGGGGG AGTCGCGCTG TTGGACTGCG TTGGGACTCC GGTGGCAGGT
TTGGGCGAAG AGGATATAAC CCCGGTGGAG GTGCCGTTCC GGAGTGGCTC GAGGCTGCTC
CTCCTTACCG ACGGAGTTGT GGATCAGGAC TCCTCTGGTG AGAGGTTTGG AGTCTTTAGG
GTCAAGGACC TGCTGGAGCG CCACGGTGCG GAGTCGCCTG AGGAGATCCT CCGGGCGATA
TACTCCGCCT TCCAGACGTT CCTTGGCGAT AAGCCCCGAA GGGACGACGT GACTATGCTG
TGCTTCGGAG CGGAATAA
|
|---|
| Protein sequence | MSDKIDPIRD LLNYHPDMLF VLDRSGRIVE AGASAFVFLG LMPNDIRGTS FANLLPPDRR
EEFLRFISRP RMLRMNRYPM VRHDGVEVTM ELHVSKGSWA GEEAIYLTAI DLSERVRSEA
QVEFYMEEME RIAMKLRQTQ QALDDQLQKA AKLHRKLMPA IPKMEGIVGA GCFDPASRIG
GDFYGVVPLG DRALAYLVDV SGHGLDGALI SLFVRDWVAE YLSGRTPSQV DPLNLLEHIS
SRFLGEELLY DYFICLQIAL FDRGKGTFRL VNAGNPVRPM LFTPEGGVAL LDCVGTPVAG
LGEEDITPVE VPFRSGSRLL LLTDGVVDQD SSGERFGVFR VKDLLERHGA ESPEEILRAI
YSAFQTFLGD KPRRDDVTML CFGAE
|
|---|
| |