| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_0112 |
|---|
| Symbol | |
|---|
| ID | 8629922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | + |
|---|
| Start bp | 119777 |
|---|
| End bp | 121642 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003316634 |
|---|
| Protein GI | 269791730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTTT TTCGATCCTT AGGAGTTAGG GGCAGAGTTC TTTTTCTCCT TGGGGCCTCC
CTTGGGGCAC TTATTGCGGT GGGATCCTTG GGCTGTCTGT CCACCCGGGG GGTTCTATCC
TCCATGGAGG CAATGAGATC CCGATGCCTG GATTCGGTCC GGGAGCTTAC GCGAATGGAG
GCAAATCTCG CCAAGGCGAA GGGCAACGTC TACGATCTGA TCTTCCTGGA TAGGACCAAG
GAGAAGGACG CGGTAACCGC TGATATAGCC GAGTGGGAAG TGGAGCAGTG GAGCTCCCAG
TGCCGGGAGC TGATAGATAG GTTCAAGGGG GCTCCGCTGG ATTCCTTCGA GGCGGAGCGG
CTGGAAGCTC TCGCTGACGC CATGAAGGAG TGGGACTCGG TCAGAGGCAT GACTTTGAAA
CTGGCGAAGG AGGGGAGGCG GGATGAGGCG CTGGTGAATT TCAAGGAGGA GGAGCTGCCC
GCCATGTCCA AGGTGCTGAA GGGGCTGGAG GTGCTTGGGG ATCACAGATC GGAGCTGGCG
GGGGGCATAT CGTCCCGGGT GGCCCGCCGG GCCTACCGCT GGTCCCTCCT GGTGGCTCTG
ATCGCCGCCG GCGCATTCTG GGGACTCCTT GTGCTGGGGT TGTCCCTATC CAACTCCATA
TCCAAGCCCC TCGGCGGGGT GATGGACGCC ATGGATCGAC TCTCCCGTGG AGACGTTGCC
CCTTCCGGTG ACTCCCTGGT GGACTCACCG GTGCCCGAAC TGTCCCGTCT TGCCCGGGGG
GTGGCCAATG CGGTGGAGCA GGTGAGGGAT TCGATCCTGG AGGTTCGGCG TTGTGCCCGG
GAGCTGCTGG ACCGGTCCTG TGAGTTCACG TCCTTGTCCG AGCGGGCCGG CGAGGGGGCC
GCCCGGGCGG CCCAGGGGGT CGATTCTCTG GCGGAGCGGC TGGAGGAGCT GATGGAGTCC
TCCCGATGCA TGGCCGCATC GGTGGAGGAG CTGTCCCAGG GGGTACAGCG GCTGTCCCAT
AGTTGCGCCC GGATGGTCCG GCAGTCCCAG GAGGCCCGGT CCGCAGGCCT ACTGGGGGCC
CAGATGGTCC AGCGGCTGTC CCAGGGGCTG GAGGGCATGG CTTCCCACGC GGAGGGGGCC
GCCCAGAGGT TGGAGGGCCT TGACAGGAGG GCGTCGGATA TCCGGGGCTT CGTGTCCCGG
ATAGAGGAGC TGTCGGATCA GACCAACCTG CTGGCGCTGA ACGCCGCCAT AGAGGCCGCC
CGGGCGGGGG ACCAGGGCAG GGGGTTCGCA GTGGTGGCCG AGGAGGTCCG GAAGCTGGCG
GAGGAGACCC GGGGGGCGGC GGTGACCATA GCCCAACTGG CCCAGGGGAT CCAGGGGGAC
GTGGCCTCCG TGGCGGAGGC GGCTAACGGG AGCCTCCATG GGTGTCTGGC CTCCAGGGAC
CTGGCGGAAC AGGCCCGGGG GGCAATAGAT ACCATGATGG GCCTGCTGGA GGAGATGAGC
TCCGACACCG GGGAGCTGGC GTCGGTGGCG GAGCGGCAGG CGACCTACAG CCAGGAGATG
GCCGCCACCG TCCGGGATAT GTCCGCCATG GCAGGCCAGG CCTTCCTGGA GTCCCGAAGG
GTCAGGATGG AGGTGCAGGG TCTTGAGGAG GAGGCCAACC TGGTGGCCCT GGGAGCCAGG
GAGGTGGAGG CCCTCTCGTA CGCCCTGGGA GAGGCGGTGG GGCGCTTCCG AGTGGAGCCG
TCTCTGACCC AGGTGGATCT GGAGGTGGAC AAGCCTTTGG AGAAGGACCA GGGCCTGGTG
GATATGACCC CATGGGTTGA AAAAATCCCC CTGGAGGGTT ACCCTTCCCA TGTGGCGGCG
ATATGA
|
|---|
| Protein sequence | MIFFRSLGVR GRVLFLLGAS LGALIAVGSL GCLSTRGVLS SMEAMRSRCL DSVRELTRME
ANLAKAKGNV YDLIFLDRTK EKDAVTADIA EWEVEQWSSQ CRELIDRFKG APLDSFEAER
LEALADAMKE WDSVRGMTLK LAKEGRRDEA LVNFKEEELP AMSKVLKGLE VLGDHRSELA
GGISSRVARR AYRWSLLVAL IAAGAFWGLL VLGLSLSNSI SKPLGGVMDA MDRLSRGDVA
PSGDSLVDSP VPELSRLARG VANAVEQVRD SILEVRRCAR ELLDRSCEFT SLSERAGEGA
ARAAQGVDSL AERLEELMES SRCMAASVEE LSQGVQRLSH SCARMVRQSQ EARSAGLLGA
QMVQRLSQGL EGMASHAEGA AQRLEGLDRR ASDIRGFVSR IEELSDQTNL LALNAAIEAA
RAGDQGRGFA VVAEEVRKLA EETRGAAVTI AQLAQGIQGD VASVAEAANG SLHGCLASRD
LAEQARGAID TMMGLLEEMS SDTGELASVA ERQATYSQEM AATVRDMSAM AGQAFLESRR
VRMEVQGLEE EANLVALGAR EVEALSYALG EAVGRFRVEP SLTQVDLEVD KPLEKDQGLV
DMTPWVEKIP LEGYPSHVAA I
|
|---|
| |