Gene Taci_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTaci_0088 
Symbol 
ID8629898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermanaerovibrio acidaminovorans DSM 6589 
KingdomBacteria 
Replicon accessionNC_013522 
Strand
Start bp96109 
End bp96897 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID 
ProductLytic transglycosylase catalytic 
Protein accessionYP_003316610 
Protein GI269791706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAG GACGAACTTG GGCCGCGGGG CTCATTTGCA TGGCCCTCCT GGCGGCGGTG 
ATCGCCTTAG CTCCACCGGG GTTCGCGGAG GACTCAGAGG AAGGGTCCTT CCGAATAGAC
GAGGTCAACC CCACCACACA ACCATCGGCT TCGAAACCGG CGGACAGCGC CGGACCCGGC
GAGGAACCGA AGCTGGTGGC CATAGAGGCA AGGGACGCGG AATACCACCA ATCCATCAAG
GACGCCCTCA GATCCATGGG GCTCTCACCC AAAGACCTGA CCGCCTGGCT ACTAAGACAC
CCGGAATCCA TACTTCACAA GCTTGGCTCC TTCTCCGCCG ACGACCAGCG CAAGGTGGCC
ACGGTGACCC GTTACATCCG GGGCACCAAC CCGAGCGTGG CCCCCATGAC GGCCCTCAGG
ACCGCCGGGG CCCTGGTGTA CTACAGCGCC AAGTACGGCA TACCGGTGCA CCTGTCCACC
GCGGTGGCCC ACACGGAGAG CCGGTTCGAC CCCAAGGCGG TGAGCAACAA GGGGGCCATG
GGGATCATGC AGGTCATGTG GCGGGTCCAC AATGGGCTCC TGCAGGCCAA CGGCATCGCC
ACCAAGGACG ACATGTTCAA CCCCGAGAAG GGGGTGGCGG CGGGGTGCCT GCTCCTGTCC
CGATACATCA ACGCCTACGG GTCCATACCC AAGGCCCTGG CCCGGTACTA CGGGGGCTCC
TCCACCGCCT ACTTCCGGAA GGTAAACACC AAGATGGCCA ACATCCGGTC CTCCATCTAT
CCCCAGTAG
 
Protein sequence
MKLGRTWAAG LICMALLAAV IALAPPGFAE DSEEGSFRID EVNPTTQPSA SKPADSAGPG 
EEPKLVAIEA RDAEYHQSIK DALRSMGLSP KDLTAWLLRH PESILHKLGS FSADDQRKVA
TVTRYIRGTN PSVAPMTALR TAGALVYYSA KYGIPVHLST AVAHTESRFD PKAVSNKGAM
GIMQVMWRVH NGLLQANGIA TKDDMFNPEK GVAAGCLLLS RYINAYGSIP KALARYYGGS
STAYFRKVNT KMANIRSSIY PQ