| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_38030 |
|---|
| Symbol | |
|---|
| ID | 8635436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 4251053 |
|---|
| End bp | 4252150 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | preprotein translocase subunit YidC |
|---|
| Protein accession | YP_003316520 |
|---|
| Protein GI | 269797065 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGA TCCTCTACCC CCTCGAGTGG GCCGTGGCGT GGATCATGTT CCTCTGCCAC
AAGCTCTTCG TGTTCATCGG GCTCCCGGAC GGCGCCGGTG TCGCGTGGAT CCTCTCCATC
GTCGGTCTCG TCATCGTCAT CAGGACGATC ATGATCCCGC TGTTCTTCAA GCAGATCCGC
GCGTCGCGCG GGATGCAGAT GGTCCAGCCG GAGCTCCAGG CGATCCAGAA GAAGTACAAG
AACAAGAAGG ACCCTGCCTC TCGCGAGGCC ATGAGCCGCG AGACGATGGC GCTCTACAAG
AAGCACGGCA CGAACCCCTT CGCCTCCTGC CTCCCGGTGC TGCTGCAGGC GCCGGTGTTC
TTCGCTCTGT TCCGCGTCCT CAACAGCCTT CGCGGGATCG CTGACGGGAC CAAGTCGGGC
ATCGGCCCGA TCGACCAGGC GGTGGCGCAG GCGGCCGAGA CGTCGTCGCT CTTCGGCGCT
CCGCTGTCGT CGACGTTCCT CCACGAGCCG ACGGACCTCA ACACCAAGAT CGTCGCCGGG
GTGCTCATCG TCTCCATGGC GGCCACGCAG TTCCTCACGC AGCGTCAGCT GACCATGAAG
AACATGCCGA AGGCGGCCCT CGAGGGCCCC ATGATGCAGA CCCAGAAGAT CATGCTCTAC
ATGCTGCCGG TCATCATGGC GGTCTCGGGC GTGAACTTCC CGGTGGGTGT CCTCATCTAC
TGGACCACCA CCAACCTGTG GTCCATGGGC CAGCAGTTCT ACACGATCCG CAAGATGCCG
GCTCCGGGCT CCGAGGCCGA GCGCCTGCTC AACGAGCGCA AGGCCCGCAA GGCGGCCCGC
AAGGGGATCG TCATCGAAGA GGACAAGCCG ACGGTCATCG AGCAGCCGCG CGGGCAGCGT
CAGCAGCCCA AGCGCAAGGA CCGTCAGAAG GCTCGTCCGG CAGGCACGGC GCCGGTGGTC
GGTGCCTCTG CGTCGACGCC GTCCTCGACC GAACCCTCCG CTCCCGAGGA CTCCTCTGCC
ACCTCCGAGT CGCCGGCTCC GAAGGCTGCG AGCACGCAGC GTCAGCAGCC GCAGGGCAAG
AAGCGCAAGA AGCGCTGA
|
|---|
| Protein sequence | MMQILYPLEW AVAWIMFLCH KLFVFIGLPD GAGVAWILSI VGLVIVIRTI MIPLFFKQIR
ASRGMQMVQP ELQAIQKKYK NKKDPASREA MSRETMALYK KHGTNPFASC LPVLLQAPVF
FALFRVLNSL RGIADGTKSG IGPIDQAVAQ AAETSSLFGA PLSSTFLHEP TDLNTKIVAG
VLIVSMAATQ FLTQRQLTMK NMPKAALEGP MMQTQKIMLY MLPVIMAVSG VNFPVGVLIY
WTTTNLWSMG QQFYTIRKMP APGSEAERLL NERKARKAAR KGIVIEEDKP TVIEQPRGQR
QQPKRKDRQK ARPAGTAPVV GASASTPSST EPSAPEDSSA TSESPAPKAA STQRQQPQGK
KRKKR
|
|---|
| |