Gene Sked_37600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_37600 
Symbol 
ID8635393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4201349 
End bp4202410 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-type proline/glycine betaine transport system, ATPase component 
Protein accessionYP_003316477 
Protein GI269797022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CACGGACCTC CCGCCACGGC TCCGACCCCG TCGGCAGCGC CTCGACGGTC 
GCCCCCGGCG ACGTCCTCAT CCGCTTCGAG GACGTCCGCA AGGAGTTCCG CAACCAGACC
GTCGCGGTCG ACGACCTCGA CCTCGAGGTC CGCAAGGGCG AGCTGCTCGT CCTCGTCGGG
CCCTCCGGGT GCGGCAAGTC CACGACGCTG CGCATGGTCA ACCGCCTCGT CGAGCCCACC
GGCGGGCGGA TCTTGCTCGA CGGCGCCGAC ATCATGTCGA CCGACGCCGT CGCCCTGCGC
CGCCGGGTCG GGTACGTCAT CCAGAACGTC GGGCTGTTCC CCCACAAGAC GGTGGCGCAG
AACGTCGCGA CCGTCCCGGG CCTGCTCGGC TGGGACCGCA AGCGCACCCG GGCCCGCGTG
GAGGAGCTGC TCACCCTCGT CGGCCTCGCC CCCGAGACCT ACTCCAAGCG GTTCCCGCAC
GAGCTCTCGG GCGGTGAGCG CCAGCGCGTC GGCGTCGCCC GCGCCCTCGC GGTCGACCCG
CCCGTCCTGC TCATGGACGA GCCCTTCGGG GCGGTCGACC CCGAGGGTCG ACGACGCCTG
CAGACCGAAT TCCGGCGCAT CCAGTCCGAG CTCGGCACCA CCGTCATGCT CGTCACCCAC
GACATCGACG AGGCCGTCCT GCTCGGCGAC CGCGTCGCCG TGTTCAGCAA GGGCGGGATC
ATCGAGCAGA TCGACACGCC GCTGCGCCTG CTGTCCCAGC CCGCGAACGC CTTCGTCGAG
AACTTCATCG GCGCCGGACG CTCCATGCGC ATGCTGGGTC TCGGCGACGT CGCACGCGAC
GACCTGCGCT CCCTCGACGC CGTGCACCCC GGTGCCGAGC TCGCCTCGAT CCCGCTCGGG
ACCACGCTCG ACGAGGCCTT CGCCGAGCTC GCCGTCTCCG AGACGGGCGC GGTGATCGTC
ACCGAGGGGG ACCAGCCCGT CGGGCTGCTC ACCGCCGACG ACCTGCTCTC GTCCCTGCGC
CGCCTCGTCG CCGAGGACCA CCGCGAGGCG CTGGCGGGCT GA
 
Protein sequence
MSSTRTSRHG SDPVGSASTV APGDVLIRFE DVRKEFRNQT VAVDDLDLEV RKGELLVLVG 
PSGCGKSTTL RMVNRLVEPT GGRILLDGAD IMSTDAVALR RRVGYVIQNV GLFPHKTVAQ
NVATVPGLLG WDRKRTRARV EELLTLVGLA PETYSKRFPH ELSGGERQRV GVARALAVDP
PVLLMDEPFG AVDPEGRRRL QTEFRRIQSE LGTTVMLVTH DIDEAVLLGD RVAVFSKGGI
IEQIDTPLRL LSQPANAFVE NFIGAGRSMR MLGLGDVARD DLRSLDAVHP GAELASIPLG
TTLDEAFAEL AVSETGAVIV TEGDQPVGLL TADDLLSSLR RLVAEDHREA LAG