Gene Sked_37590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_37590 
Symbol 
ID8635392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4200562 
End bp4201278 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type proline/glycine betaine transport system, permease component 
Protein accessionYP_003316476 
Protein GI269797021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGCGC CCCTGTGGGC GGCAGCCGGT ACCGTCGGGC AGATGAATCC CGAGCAGCCG 
GCCAACCCAT GGCTGTCCTG GCAGTACGTG CAGGACAACT CGGACGAGAT CCTCCGCTAC
CTGGGGGAGC ACGTGTCCCT CACGCTCCAG GCGATCGCGA TCGCCCTGGT CGTCGCGATC
CCGCTGGCCG CCCTCGCCCA CGCCTGGCCC TGGCTGTCCG GGCCGCTGGT CGCGACGACG
GGCGTGCTCT ACACGATCCC GTCGCTCGCG CTCTTCGCGG TGGTCTACCC GTTCATCCGT
GACCGGCGCA GCACCGTGCT GCTGGGTCTG GTGCTCTACG CGCTGCTGCT GCTGGTCCGC
AACACCCTCG TCGGGCTGCG CGGTGTGGAC CCGGCGGTGA CCGACGCCGC CCGCGGCCTG
GGCTACGGCC GCTGGCGGAT GCTCTTCACG GTCGAGATGC CCAACGCGCT GCCCGCCGTC
ATCACCGGCC TGCGGCTCGC GTCGGTGAGC ACCGTCGCCC TGGTGACCGT GGGCGTGGTC
ATCGGCTACG GCGGTCTGGG CCAGCTGATG TTCCGCGGCT TCACCAGCGG TTACCACGCG
CAGATCATGA CGGCCACGCT GCTGTGCCTG GCGCTCGGCC TGCTCATCGA CCTCGTGCTG
TACCTCGTCG GCCGGCTCGT CACGCCCTGG TCGCGGGCGG CGGTGAGCTC GCGATGA
 
Protein sequence
MPAPLWAAAG TVGQMNPEQP ANPWLSWQYV QDNSDEILRY LGEHVSLTLQ AIAIALVVAI 
PLAALAHAWP WLSGPLVATT GVLYTIPSLA LFAVVYPFIR DRRSTVLLGL VLYALLLLVR
NTLVGLRGVD PAVTDAARGL GYGRWRMLFT VEMPNALPAV ITGLRLASVS TVALVTVGVV
IGYGGLGQLM FRGFTSGYHA QIMTATLLCL ALGLLIDLVL YLVGRLVTPW SRAAVSSR