Gene Sked_37380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_37380 
Symbol 
ID8635371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4179207 
End bp4179719 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003316455 
Protein GI269797000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00623075 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC CGACCGCACC CCAGGACCCT CGCTGGCTCT CCGCCGACGA GAACCTCACC 
TGGCTGCGCC TGTCCGAGGT CATCATCCGG CTCCCGTCGG CGCTCGACGC CCAGCTCACT
CGTGACGCGG GGATCAGCTT CTACGAGTAC ATGGTCCTCG CCATGCTGTC CGAGCAGGAC
GACCGGACCC TGGGCATGGG GCAGCTCGCC CGGCTGACCA GCGGGTCGCT GTCGCGCCTG
TCGCACGTGG TCAAGCGCCT CGAGAAGCAG GGCTTCGTCC GCCGCGAGCC GAGCGTCCGC
GACCGTCGGC ACACCAACGC GATCCTCACC GAGGCGGGTC TCGACAAGAT CGTCGCGACC
GCCCCGGGAC ACGTCGAGAA CGTCCGCAGC CTCGTCTTCG ACGCGCTGAC CCCAGAGCAG
TCGCACGGGC TCCGCGACGC CACGTCCCTG ATCCGCGACC AGATCGACCC CACCGACGAG
TGGAAGATCG CCCCGGACTC CCCGACCGCC TGA
 
Protein sequence
MTDPTAPQDP RWLSADENLT WLRLSEVIIR LPSALDAQLT RDAGISFYEY MVLAMLSEQD 
DRTLGMGQLA RLTSGSLSRL SHVVKRLEKQ GFVRREPSVR DRRHTNAILT EAGLDKIVAT
APGHVENVRS LVFDALTPEQ SHGLRDATSL IRDQIDPTDE WKIAPDSPTA