Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_37380 |
Symbol | |
ID | 8635371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 4179207 |
End bp | 4179719 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | transcriptional regulator |
Protein accession | YP_003316455 |
Protein GI | 269797000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00623075 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC CGACCGCACC CCAGGACCCT CGCTGGCTCT CCGCCGACGA GAACCTCACC TGGCTGCGCC TGTCCGAGGT CATCATCCGG CTCCCGTCGG CGCTCGACGC CCAGCTCACT CGTGACGCGG GGATCAGCTT CTACGAGTAC ATGGTCCTCG CCATGCTGTC CGAGCAGGAC GACCGGACCC TGGGCATGGG GCAGCTCGCC CGGCTGACCA GCGGGTCGCT GTCGCGCCTG TCGCACGTGG TCAAGCGCCT CGAGAAGCAG GGCTTCGTCC GCCGCGAGCC GAGCGTCCGC GACCGTCGGC ACACCAACGC GATCCTCACC GAGGCGGGTC TCGACAAGAT CGTCGCGACC GCCCCGGGAC ACGTCGAGAA CGTCCGCAGC CTCGTCTTCG ACGCGCTGAC CCCAGAGCAG TCGCACGGGC TCCGCGACGC CACGTCCCTG ATCCGCGACC AGATCGACCC CACCGACGAG TGGAAGATCG CCCCGGACTC CCCGACCGCC TGA
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Protein sequence | MTDPTAPQDP RWLSADENLT WLRLSEVIIR LPSALDAQLT RDAGISFYEY MVLAMLSEQD DRTLGMGQLA RLTSGSLSRL SHVVKRLEKQ GFVRREPSVR DRRHTNAILT EAGLDKIVAT APGHVENVRS LVFDALTPEQ SHGLRDATSL IRDQIDPTDE WKIAPDSPTA
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