| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_37130 |
|---|
| Symbol | |
|---|
| ID | 8635346 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 4143981 |
|---|
| End bp | 4147093 |
|---|
| Gene Length | 3113 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.756619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TGTCAAGTTT TTAAGGGCAC AGGGTGGATG CCTTGGCACT AGGAGCCGAT GAAGGACGTA
GTAGCCTGCG ATAAGCCTCG GGGAGTTGGC AAACGAACTG TGATCCGAGG ATTTCCGAAT
GGGGAAACCC AGCACGAGTT ATGTCGTGTT ACCTGCACCT GAATATATAG GGTGTGTGGA
GGGAACGTCG GGAAGTGAAA CATCTCAGTA CCGACAGGAA GAGATATTCC GTGAGTAGTG
GCGAGCGAAA GCGGATGAGG CCAAACCGTT CATGTGTGAT ACCCGGCAGG GGTTGCATGG
GCGGGGTTGT GGGACCTTTC AGATGAGTCT GCCGGCTTGT CAGGGAGTCA GAAAGTCATG
TGATAGTCGA AGGGCATTGA AAGGCCCGGC GTAGAGGGTG TGACCCCCGT AGACGAAATC
ATGTGGCCTC CCGAAGGGGA TCCCAAGTAG CACGGGGCCC GAGAAATCCC GTGTGAATCC
GTGAAGACCA CTTCATAAGC CTAAATACTA CCTAGTGACC GATAGCGGAC AAGTACCGTG
AGGGAAAGGT GAAAAGTACC CCGGGAGGGG AGTGAAATAG TACCTGAAAC CGTGTGCCTA
CAATCCGTTG GAGCCTCCTT AGCAGGGGTG ACAGCGTGCC TTTTGAAGAA TGAGCCTGCG
AGTTAGTGCT CAGTGGCGAG GTTAACCCGT GTGGGGAAGC CGTAGCGAAA GCGAGTCCGA
ATAGGGCGTC AGAGTCGCTG GGTCTAGACC CGAAGCGAAG TGATCTACCC ATGGGCAGGT
TGAAGCGCGG GTAAGACCGC GTGGAGGACC GAACCCACCT AGGTTGAAAA CTGGGGGGAT
GACCTGTGGG TAGGGGTGAA AGGCCAATCA AACTTCGTGA TAGCTGGTTC TCCCCGAAAT
GCATTTAGGT GCAGCCTCGC GTGTTTCTTG CCGGAGGTAG AGCTACTGGA TAGCCGATGG
GCCCTACAAG GTTACTGACG TTAGCCAAAC TCCGAATGCC GGTAAGTGAG AGCGCGGGAG
TGAGACTGCG GGGGATAAGC TCCGTAGTCG AGAGGGAAAC AGCCCAGACC ACCAGCTAAG
GCCCCTAAGC GTGTGCTAAG TGGGAAAGGA TGTGGAGTTG CACAGACAAC CAGGAGGTTG
GCTTAGAAGC AGCCACCCTT GAAAGAGTGC GTAATAGCTC ACTGGTCAAG TGATTCCGCG
CCGACAATGT AGCGGGGCTC AAGTACACCG CCGAAGCTGT GGCATTCACA TAATAACCAG
GCCTTCGTGG TCCAGGTGTG TGGATGGGTA GGGGAGCGTC GTGTGGGCAG TGAAGCTGCG
GGGGAACCCA GTGGTGGAGC CTACACGAGT GAGAATGCAG GCATGAGTAG CGAAAGACGG
GTGAGAAACC CGTCCGCCGA ATGATCAAGG GTTCCAGGGC CAGGCTAATC CGCCCTGGGT
AAGTCGGGAC CTAAGGCGAG GCCGACAGGC GTAGTCGATG GACAAGGAGT TGATATTCTC
CTACCGGCGA AGAACCGCCC ATACCGAGCC CGGTGATGCT AACCGCCCAA GCCTGGTCTA
CAGGCCCTTC GGGGCTGAGG ACTCAGGGGA GCGCGGGACC CGAACCGGTA GTAGGTAAGC
GTATTAACAG GAGTGACGCA GGAAGGTAGC CAAGCCGAGC GACGGTTGTC TCGGTCTAAG
GACGTAGGGC GAACAGTAGG CAAATCCGCT GTTCATATAG CCTGAGATCT GACGGGACCC
ACCCTAGGTG GGGATTTGGT GATCCTATGC TGCCGAGAAA AGCTTCGACG CGAGGTTCAA
GCCGCCCGTA CCCTAAACCG ACTCAGGTGA TCAGGTAGAG AATACTAAGG CGATCGAGAG
AATCATGGTT AAGGAACTCG GCAAAATGCC CCCGTAACTT CGGGAGAAGG GGGGCCCGGA
GCGTGAAGCC ACTAGCTGGC CGAGCGTGCA AGGGCCGCAG AGACCAGGGA GAAGCGACTG
TTTACTAAAA ACACAGGTCC GTGCGAAGTC GCAAGACGAT GTATACGGAC TGACGCCTGC
CCGGTGCTGG AAGGTTAAGA GGACGGGTTA GCCGTAAGGC GAAGCTCAGA ATTTAAGCCC
CAGTAAACGG CGGTGGTAAC TATAACCATC CTAAGGTAGC GAAATTCCTT GTCGGGTAAG
TTCCGACCTG CACGAATGGC GTAACGACTT CTCCGCTGTC TCAACCGTGA ACTCGGCGAA
ATTGCACTAC GAGTAAAGAT GCTCGTTACG CGCAGCAGGA CGGAAAGACC CCGGGACCTT
TACTATAGTT TGGTATTGGT GTTCGGTGCG GCTTGTGTAG GATAGGTGGG AGACTGTGAA
GCGGGCACGC CAGTGTTCGT GGAGTCAACG TTGAAATACC ACTCTGGTCG CTCTGGACAT
CTAACCTCGG TCCGTAATCC GGATCAGGGA CAGTGCCTGA TGGGTAGTTT AACTGGGGCG
GTTGCCTCCT AAAATGTAAC GGAGGCGCTC AAAGGTTCCC TCAGCCTGGT TGGCAATCAG
GTGTCGAGTG CAAGTGCACA AGGGAGCTTG ACTGTGAGAC TGACAGGTCG AGCAGGGACG
AAAGTCGGAA CTAGTGATCC GGCGGTGGCT TGTGGAAGCG CCGTCGCTCA ACGGATAAAA
GGTACCCCGG GGATAACAGG CTGATCTTGC CCAAGAGTCC ATATCGACGG CATGGTTTGG
CACCTCGATG TCGGCTCGTC GCATCCTGGG GCTGGAGTAG GTCCCAAGGG TTGGGCTGTT
CGCCCATTAA AGCGGTACGC GAGCTGGGTT TAGAACGTCG TGAGACAGTT CGGTCCCTAT
CCGCTGCGCG CGCAGGAAAC TTGAGAAGGG CTGTCCCTAG TACGAGAGGA CCGGGACGGA
CGAACCTCTG GTGTGCCAGT TGTTCCGCCA GGAGCACGGC TGGTTGGCTA CGTTCGGAAG
GGATAACCGC TGAAAGCATC TAAGCGGGAA GCCTGCTTCA AGATGAGGTT TCCATGAGGG
CTTGACCCTC GAGAGGCTCC CAGCAGACCA CTGGGTAGAT AGGCCGGACG TGGAAGAGAG
GACTAACGAC TCTCGGAGCT GACCGGTACT AATAAGCCGA TAACTTGATA ACA
|
|---|
| Protein sequence | |
|---|
| |