Gene Sked_37030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_37030 
Symbol 
ID8635336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4136317 
End bp4137042 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content73% 
IMG OID 
Productshort-chain alcohol dehydrogenase 
Protein accessionYP_003316423 
Protein GI269796968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.731779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC TGCACAACGC CGTCGTCCTG GTCACCGGAG CGAACGGAGG CATCGGCAGC 
TCCTTCGTCC GCGCCGCTCT CGCCCGCGGC GCGGCGAGGG TCTACGCGAC CGCACGCTCT
CCGCGCGCCT GGGACGACGA GCGGGTCGTC CCGCTCACCC TCGACGTCAC CGACCCGGCG
TCGGTCGCCG CAGCCGTCGA GGCCGCACCC GACGTCACCG TGCTCGTCAA CAACGCCGGC
GGCCTCCCGC AGACGGCCAG CATCCTCGAG GTCGACGAGG CCGACCTCCG CCAGACCATG
GAGATCAACT TCTTCGCGCC GCTGCTCGTC GCGCGCGCCT TCGCGCCGGC CCTGCGCGCC
GCCGACGGCG CGGTGCTCGT CGACATGCAC TCCGTCGCCA GCTGGCTCGC CTCGGGCGGT
CCGTACAGCG CGTCGAAGGC CGCCCTCTGG TCGGCGACGA ACTCGTTGCG GGTCGAGCTC
GCACCGCACG GGGTGCTCGT CACCGGCGTG CACGTCGGCT ACGTCGACAC CGCGATGGCA
GCGCACGCCG ACGGCCCCAA GATGGCACCG GACGACCTCG TGACCGCCGT TCTCGACGGC
GTCGAGGCGG GCGCCCACGA GGTGGTCGCC GACGAGCTCA GCGCAGCCGT CAAGGCAGGT
CTGTCAGGAC CGGTCGAGGC CCTCTACCCC GAGCTGGTCC ACGCAGATGA CCATGCAGGC
GCCTGA
 
Protein sequence
MTSLHNAVVL VTGANGGIGS SFVRAALARG AARVYATARS PRAWDDERVV PLTLDVTDPA 
SVAAAVEAAP DVTVLVNNAG GLPQTASILE VDEADLRQTM EINFFAPLLV ARAFAPALRA
ADGAVLVDMH SVASWLASGG PYSASKAALW SATNSLRVEL APHGVLVTGV HVGYVDTAMA
AHADGPKMAP DDLVTAVLDG VEAGAHEVVA DELSAAVKAG LSGPVEALYP ELVHADDHAG
A