Gene Sked_37020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_37020 
Symbol 
ID8635335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4135401 
End bp4136240 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content74% 
IMG OID 
Productshort-chain dehydrogenase of unknown substrate specificity 
Protein accessionYP_003316422 
Protein GI269796967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCG CCTCGACCGG CATGGGGGCG GCGACCGCCC GAGAGCTGGC TTCTCGCGGC 
TACCACGTGC TCGCCGGCGT CCGCCGACAG GCCGACGGCC AGGCCCTCGA GTCGGCCCGG
ATCCGCCCGG TCATCCTCGA CATCACCCGC CCGGAGCAGG TCGCCGAGCT GGTACGCACC
GTCGAGGCCG ACGGCCGGCC GCTCCGCGCG GTGGTCAACA ACGCCGGCAT CGCGGTCAAC
GCCCCCGTCG AGGTGCTGCC GATGGCCGAG TGGCGCCGAC AGTTCGACGT GAACTTCTTC
GGCCACGTCG AGGTCACCCA GGCCCTCCTG CCTGCCCTGC TGCGCAGCAG GGGCCGGGTC
GTCATGATGA GCTCCCTCGG CGGTCGGCTC GCCCAGCCCA CCTACGGGGC CTACTCGGGG
TCGAAGTTCG CCCTCGAGGC CGTCAGCGAC GCGCTGCGCC GCGAGCTCGC CCCGCACGGC
GTCACCGTCG CGATCGTCGA GCCCGGTGCC GTCCGTACCG AGATGGTCGG CCGCGGAGGT
GTCACTGCAC GACGCCTCGT CGACGGCATG ACCGCCGAGC AGGAGCAGCG GTACGCCGGG
CTCATGGACG CGATCCTCGC CCAGTCCGAG ACCTTCCTGC GCGGCGGCGT CGAGTCCGCC
CAGGCCGCGA AGACCATCGC GGACGCTGCG ACCACGAGAC GCCCCAGGAC GCGCTACACG
ATCGGTCGCG ACGCCGCCCT CCTCACGCGC CTCGCGCGGA TCCTGCCGGA CCGCGTGCTG
GACCGCCTGC TCTCGTCGGC GCTCAGCAAG AATGCGCCGG CCGCGCCGAC CGCGCACTGA
 
Protein sequence
MTGASTGMGA ATARELASRG YHVLAGVRRQ ADGQALESAR IRPVILDITR PEQVAELVRT 
VEADGRPLRA VVNNAGIAVN APVEVLPMAE WRRQFDVNFF GHVEVTQALL PALLRSRGRV
VMMSSLGGRL AQPTYGAYSG SKFALEAVSD ALRRELAPHG VTVAIVEPGA VRTEMVGRGG
VTARRLVDGM TAEQEQRYAG LMDAILAQSE TFLRGGVESA QAAKTIADAA TTRRPRTRYT
IGRDAALLTR LARILPDRVL DRLLSSALSK NAPAAPTAH