| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_37000 |
|---|
| Symbol | |
|---|
| ID | 8635333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 4133952 |
|---|
| End bp | 4134671 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase of unknown substrate specificity |
|---|
| Protein accession | YP_003316420 |
|---|
| Protein GI | 269796965 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.559047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC TCCACGGAGC AGTCGTCCTC GTCACCGGCG CGAACGGGGG CATCGGCACG
CACCTCGTCC ACGACGCCCT GGCCCGCGGC GCCAGCAAGG TCTACGCGAC CGCCCGCAAC
CCGCGCCGGT GGGACGACGA GCGGATCGTG CCGCTGACGC TCGACGTCAC CGACGGCGCC
TCCATCGCCG CCGCCGTCGA GGCAGCACCC GACGTCACGG TGCTGATCAA CAACGCCGGC
GCCAACGTCT CGAGCCCCGG CATCCTCACG CACACCGACG AGGAGATCCG GGCGAACGTC
GAGACCAACT TCCTCGGCCC GCTGTTCCTC GCCCGCGCCT TCGCGCCGGT CCTCGTGGCG
AACGGCTCCT CGACGATCGT CGACATCCAC TCGGCCCTCG CCTGGTACGC CGTCGCCGGG
ATCTACAGCG CCACCAAGGC GGCCCTGTGG TCGGCGACCA ACTCGCTGCG CGTCGAGCTC
GCCCCGCAGG GCGTCCACGT CGTCGGCGTG CACGTCGGCT ACGTCGACAC CGCGATGGCC
GCCCACGCGA CCGACCCCAA GCTCGACCCG GCCGACCTGG TCCGCCAGGT CCTCGACGCC
GTCGAGACGG ACCAGTACGA GGTCCTCGCC GACCAGACCT CGGTCCAGCT CAAGGCAGCC
CTCAGCGCAC CGCTCGAGGC GCTGTACCCG GAGCTCGTGA AGACGACCGA CGAGGCCTGA
|
|---|
| Protein sequence | MPALHGAVVL VTGANGGIGT HLVHDALARG ASKVYATARN PRRWDDERIV PLTLDVTDGA
SIAAAVEAAP DVTVLINNAG ANVSSPGILT HTDEEIRANV ETNFLGPLFL ARAFAPVLVA
NGSSTIVDIH SALAWYAVAG IYSATKAALW SATNSLRVEL APQGVHVVGV HVGYVDTAMA
AHATDPKLDP ADLVRQVLDA VETDQYEVLA DQTSVQLKAA LSAPLEALYP ELVKTTDEA
|
|---|
| |