Gene Sked_36860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36860 
Symbol 
ID8635319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4121083 
End bp4121733 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID 
Productamino acid ABC transporter membrane protein 
Protein accessionYP_003316406 
Protein GI269796951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.248574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.989507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGCAC TGGTCGACGA GCTGCCGAGG ATCTGGCAGG GGTTCCAGCT CACCCTGTTC 
CTCGCCGTCG TGTCGGGAGC CCTCTCCCTC GTCTTCGGGA CGATCCTGGC CGCGTTCCGT
GTCGCGCCGC TGCGCTCGCT GCGCACCTTC GCCGGCGCGT ACGTCGAGGT CGCGAGGAAC
ACCCCGCTGA CGCTGGTGTT CATCTTCTTC GTCTTCGTGC TCCCGAGCCT CGGGTTCATC
CTGCCGCTCG GCCGGGTGCC CGCCATCATC GCACTCACCG CCTACACCTC GGCCTTCGTG
TGCGAGGCCG TGCGGTCGGG CATCAACTCG GTCGCCGTCG GGCAGGCCGA GGCGGCCCGC
GCCATCGGCC TCGGGACCGT CCAGACGCTC AGCCTCGTGG TCCTGCCGCA GGCGCTGCGC
ACCGTGGTGC CCCCGCTGAT CAACGTGCTC ATCGCACTCA CCAAGAACAC GTCGGTGGCC
GCAGGCTTCG CGGTCGTCGA GCTCACCTCG ACGAGCCGAG CCCTCGCCCG CGACAACCCG
GCCGACGTCG TCCTGCTGCT CACCGGCATC GCCGTCTGCT ATCTCGTCAT CACGATCCCC
GCGGGGATCG CGGCCAATGC CATCGAGCGA AAGGTGGTGT TCAGCCGATG A
 
Protein sequence
MQALVDELPR IWQGFQLTLF LAVVSGALSL VFGTILAAFR VAPLRSLRTF AGAYVEVARN 
TPLTLVFIFF VFVLPSLGFI LPLGRVPAII ALTAYTSAFV CEAVRSGINS VAVGQAEAAR
AIGLGTVQTL SLVVLPQALR TVVPPLINVL IALTKNTSVA AGFAVVELTS TSRALARDNP
ADVVLLLTGI AVCYLVITIP AGIAANAIER KVVFSR