Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_36860 |
Symbol | |
ID | 8635319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 4121083 |
End bp | 4121733 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | amino acid ABC transporter membrane protein |
Protein accession | YP_003316406 |
Protein GI | 269796951 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.248574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.989507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGCAC TGGTCGACGA GCTGCCGAGG ATCTGGCAGG GGTTCCAGCT CACCCTGTTC CTCGCCGTCG TGTCGGGAGC CCTCTCCCTC GTCTTCGGGA CGATCCTGGC CGCGTTCCGT GTCGCGCCGC TGCGCTCGCT GCGCACCTTC GCCGGCGCGT ACGTCGAGGT CGCGAGGAAC ACCCCGCTGA CGCTGGTGTT CATCTTCTTC GTCTTCGTGC TCCCGAGCCT CGGGTTCATC CTGCCGCTCG GCCGGGTGCC CGCCATCATC GCACTCACCG CCTACACCTC GGCCTTCGTG TGCGAGGCCG TGCGGTCGGG CATCAACTCG GTCGCCGTCG GGCAGGCCGA GGCGGCCCGC GCCATCGGCC TCGGGACCGT CCAGACGCTC AGCCTCGTGG TCCTGCCGCA GGCGCTGCGC ACCGTGGTGC CCCCGCTGAT CAACGTGCTC ATCGCACTCA CCAAGAACAC GTCGGTGGCC GCAGGCTTCG CGGTCGTCGA GCTCACCTCG ACGAGCCGAG CCCTCGCCCG CGACAACCCG GCCGACGTCG TCCTGCTGCT CACCGGCATC GCCGTCTGCT ATCTCGTCAT CACGATCCCC GCGGGGATCG CGGCCAATGC CATCGAGCGA AAGGTGGTGT TCAGCCGATG A
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Protein sequence | MQALVDELPR IWQGFQLTLF LAVVSGALSL VFGTILAAFR VAPLRSLRTF AGAYVEVARN TPLTLVFIFF VFVLPSLGFI LPLGRVPAII ALTAYTSAFV CEAVRSGINS VAVGQAEAAR AIGLGTVQTL SLVVLPQALR TVVPPLINVL IALTKNTSVA AGFAVVELTS TSRALARDNP ADVVLLLTGI AVCYLVITIP AGIAANAIER KVVFSR
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