Gene Sked_36300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36300 
Symbol 
ID8635263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4062077 
End bp4063261 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content75% 
IMG OID 
Product16S rRNA m(2)G 1207 methyltransferase 
Protein accessionYP_003316350 
Protein GI269796895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.858818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCT CCCCCGACCC GCACGAGCCG ACGCCCGACG GCACCGACAG GCTGCTCCTC 
CACGAGGCCG CCGACGACCT GCGCGAGGCG CACGCGGCGC ACGAAGGGCG CGAGAGTCGC
GAGAGGCACG ACGACGTCGT GGTGCTCGAC GACCGCTCGG GGGCGCTCGT GCTCGGGGTG
CTCGCGGGGC TCGAGGAGCG CGCGCCGGAG AGCAGCGGGC CGACGCCGGT ACCCGCTCCC
CGCGTCCGCT CCGCCCAAGA CCGGGTGACC TCCGAGCGTT CGCTCCAGGC AGCCCTCGCC
GACGCCGGTG CATGCGACCG TGTCACCGTG CACGCCGGGC TCGGACCTGA CCTGCTCCGC
GACGCCCGTG TGGTGCTGCT GCGCCTGCCC AAGAGCCTCG ACGCCCTCGA GGAGACTGCC
CAGGCGGTCG CACGGTGGGC GCCCGACGAC GTGGTCGTCT ACGCCGGTGC CCCGGTCAAG
CACATGACCC GGACCATGAA CGAGGTGCTG CTGCGGTCCT TCGGCGAGGT CCACGCGACG
CTCGGACGCC ACAAGGCGCG GGCGCTCGTC GCCCGCCGCC CCCTCGACGC CGCGCGCACC
ACCGAGCCGA CCTTCCCGCG GACCGCACGG CTGGACGAGC TCGACCTCAC CGTCGTCGCG
CACGGCGGGG TGTTCGCCGG GACCCGCCTC GACATCGGGA CCAGGACCCT CCTCGGCGTC
CTCGACCAGG CCGCACCCGA GGCCCGGGAC GCCGTCGACC TCGGCTGCGG GACGGGCGTG
CTCGCGACCG TGCTCGCCCG GTCGCGCCCC GGGCTGCGGG TCGTCGCCTC CGACCAGTCG
GCCGCAGCCG TCGCCTCGAC GCTCGCCACC GCAGGGGCCA ACGGCGTCGG CGACCGTGTC
ACGGGCCTGC GGGACGACGC GCTCTCGACC CTCCCCGACG CCTCGGCCGA CCTCGTGGTG
TGCAACCCGC CGTTCCACGA GGGCACCACG CTCGAGACCG ACGCCGCGCA CCGCATGTTC
GCCGCAGCCG CGCGCGTGCT CCGGCCCGGC GGCGAGCTGT GGACCGTCTA CAACTCGCAC
CTGCGGCACA AGAGCGCGCT CGGTCGCGTC GTCGGGCCGA CCACGATGGT CCTGCAGAAC
CCGAAGTTCA CGGTCACGCG GTCGGTGCGC CCGGACGGGG CCTGA
 
Protein sequence
MPASPDPHEP TPDGTDRLLL HEAADDLREA HAAHEGRESR ERHDDVVVLD DRSGALVLGV 
LAGLEERAPE SSGPTPVPAP RVRSAQDRVT SERSLQAALA DAGACDRVTV HAGLGPDLLR
DARVVLLRLP KSLDALEETA QAVARWAPDD VVVYAGAPVK HMTRTMNEVL LRSFGEVHAT
LGRHKARALV ARRPLDAART TEPTFPRTAR LDELDLTVVA HGGVFAGTRL DIGTRTLLGV
LDQAAPEARD AVDLGCGTGV LATVLARSRP GLRVVASDQS AAAVASTLAT AGANGVGDRV
TGLRDDALST LPDASADLVV CNPPFHEGTT LETDAAHRMF AAAARVLRPG GELWTVYNSH
LRHKSALGRV VGPTTMVLQN PKFTVTRSVR PDGA