| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_36150 |
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| Symbol | |
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| ID | 8635248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 4043083 |
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| End bp | 4045266 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | putative collagen-binding protein |
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| Protein accession | YP_003316335 |
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| Protein GI | 269796880 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCGC ACCACCCGAC CGACCGCACG CCCGACCCCC ACCGCACGCC TGGTCGCGCA
CCAGGCCGCC CGCGCCGACC ACGGTCCGTC CGCCGGCCGC TGCGGGTCGT CGCTGTCCTC
TCCGCCGCAG CGCTCGCACT CGGCGGCGGG CTGCTCGCCC CTGCTACCGC CGCGACGACG
ACCGGGTGGG CCGACTGGGA GCCGCTCTCA GGCGGCGCCG GCGCCTGGAC GACCTCGATC
GCGCCGCTCG CAGGGGGCTT CCCCGGAGCG ACGATGACCT CGGACTCGCG CGGCGGGGGC
GTCGCCGTGA TCTCGGGCGA GAACAACTGG CTCAGCGCTG GCACCCCGGT CGGCCAGAAG
TACGGCAGCA GCCGGAACCA GGAGTACCTC AACCTCCGCC CGCGGGTCGA CTCCCCGACC
GGGGCGTCGA CCACCACCTA CACCTTCGAC ACCCCGACCC CGGCGAGCGG GTGGACCTTC
GTGCTCGGCG ACATCGACGC CGACCAGGTC CAGGTCTCCG CGACCGGCAC CTCCGGCCGC
CTGCTGACGG CGGACGAGCT CGGGTTCCGC GGTGGGTTCA ACTACTGCGC CCCGGGCCTG
ACCGGGAAGC CCTCGTGCAC AGGGGCCGCC GACGACGTCC CGTCGTGGGA CGCGACGACC
CGGACACTCA CCGGCAACGT CGCGGCGATC GACACCTCGG GAGCCGCCGG GTGGTTCGAG
CCCACCGAGC AGGTCTCGTC GCTCACCCTC ACCTTCACGC GCCGCGCCGG CTTCCCCGTC
TACCAGACGT GGTTCGCCGC CCTCGCCCGT GACGTGAGCG GCGTCGTCAC CGACGTCACC
CCCGGCGCCG AGGGCCCGCT GGAGGGCACG ACCCTCACCC TCGTCGGCCC GCAGGGCCAG
GTGCTCGCGA CGACGACGTC CGCAGCCGAC GGTTCGTACT CCTTCGAGGG CTACACGGCG
ACCGCCGGGT ACCAGGTCGA GGTGACCCCG CCGGACGGGA AGATCGCGAC CACACCGGTC
CGCCTCCCGG CGGACCTCTC GACGACCGAC GCGACGGCCG TGGACTTCGC GGTCCGCGAC
ATCGTGCCCG CCGCGGTCAG CGGCACCGTG CGCGACGACA CCGGTCTCCC GCTCGGCGGG
GTCACCGTCA CCATCACGAC CCCGGACGGA CCGCTCTCCG TCCTCACCCG GTCCGACGGC
AGCTACCTCT TCGACACCGT GCCCGAGGGC GAGCACGTGC TGTCCGTCAC GACTCCCGAC
GGCTACACGG TGCTCACCTC GCCGACCCCC GCGCTGATCC CGCCCGGCTC CGAGGTCCCC
GTGACCGACA AGGACTTCGT GCTGCAGCCC GCGGCCACGG TGTCCCTGGC AGGAGCGGTC
ACCGCCCCGG GCGGGCCGGT GCCGGGCGCC GTCGTCACGG CCACCGGCCC CGGCGGGGAG
ACGGTCCAGA CGCTCACCGC GACCGACGGC ACCTACACCT TCGGTGACCT CGCCCCGGGA
GCGTGGACCG TGACGGTCGA GCCCCCGGCC GGGTACGTCG TCGTCGGGCC CGCGACGCGC
GAGGAGACCA TCGGCGCCAC CGACGTGACG GGCGTCGACT TCACGCTCGC GCTGCTCGGA
GCGGTCAGCG GGCAGGTCAC CACCGACGAC GGGACACCGG TCGCCGGGGT CGAGCTGCTC
GTCGAGGGCC CTGACGGGGC CGCCACCGTG ACGACCGACG CGTCCGGTGG CTACGCGGCC
GACGGGCTCC CGCCGGGCGA GTACACGGTC ACCATCACCG CCCCGGAGGG CTTCACGGTC
GAGGGGGCGA CCACGCTGAC CGTCACGATC ACGCCGGCCG GTGACGTGAT CACCGACCAA
GACTTCGTGC TGCTCGCGGT GGTCACCCCC GAGCCCACGC CCGAGCCGAC GACGGCCGAG
CCCACGGATC CGCCGACCAC GGTCGACCCG ACCGACGAGC CCACCGACCC GACGGCACCT
CCCACGACCG GCAGCCCGAC CAGCCCGGCC CCGGGAACGA CGCCGCCGGG CGGCCCGGGC
GGGCCGGGGG CCCCGGGCTC GGGTGGCGGT GGCCTACCGG TCACGGGTGG TGACCCGGCA
GCACCGCTCG CCGTGGCAGC GTTCCTCGTG GTCGTCGGGG TCGGCACGCT CGCGGTCCGC
AGACGGGCGG GCGCGCGCCG CTGA
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| Protein sequence | MAPHHPTDRT PDPHRTPGRA PGRPRRPRSV RRPLRVVAVL SAAALALGGG LLAPATAATT
TGWADWEPLS GGAGAWTTSI APLAGGFPGA TMTSDSRGGG VAVISGENNW LSAGTPVGQK
YGSSRNQEYL NLRPRVDSPT GASTTTYTFD TPTPASGWTF VLGDIDADQV QVSATGTSGR
LLTADELGFR GGFNYCAPGL TGKPSCTGAA DDVPSWDATT RTLTGNVAAI DTSGAAGWFE
PTEQVSSLTL TFTRRAGFPV YQTWFAALAR DVSGVVTDVT PGAEGPLEGT TLTLVGPQGQ
VLATTTSAAD GSYSFEGYTA TAGYQVEVTP PDGKIATTPV RLPADLSTTD ATAVDFAVRD
IVPAAVSGTV RDDTGLPLGG VTVTITTPDG PLSVLTRSDG SYLFDTVPEG EHVLSVTTPD
GYTVLTSPTP ALIPPGSEVP VTDKDFVLQP AATVSLAGAV TAPGGPVPGA VVTATGPGGE
TVQTLTATDG TYTFGDLAPG AWTVTVEPPA GYVVVGPATR EETIGATDVT GVDFTLALLG
AVSGQVTTDD GTPVAGVELL VEGPDGAATV TTDASGGYAA DGLPPGEYTV TITAPEGFTV
EGATTLTVTI TPAGDVITDQ DFVLLAVVTP EPTPEPTTAE PTDPPTTVDP TDEPTDPTAP
PTTGSPTSPA PGTTPPGGPG GPGAPGSGGG GLPVTGGDPA APLAVAAFLV VVGVGTLAVR
RRAGARR
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