Gene Sked_36100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36100 
Symbol 
ID8635243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4039134 
End bp4040720 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003316330 
Protein GI269796875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0679941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGCGC AGCTCGTGAG GCTCCGCCTC ACCCTCCTCG GCAACCTCCT CAAGCGCTCC 
GCCTGGCAGA TCGTCGGCTT CGCCTTAGCC GCACTCTACG GCGCGTCGAT CCTGCTCGTC
ATGGTCGGCG GGCTCTTCGT GCTGAGCATC GACGACGCCT CGACTGCCCA GGCGGTGGTC
GTCGCCGGCG GGTCCGTGGC CGTCCTCGGG TGGTGGCTGC TGCCGCTGGT GACCTTCGGT
GTCGACTCCT CGCTCGACCC CCGCAAGCTC GCGCTGCTGC CCATCCACCG GCGCGACCTG
CTCCTCGGGC TCGCCGCCGC GGGCGTCGTC GGGATCCCCG GGATCGTCAC GACCATCGCC
TCGTTCAGCA GCCTGGTCGT CTGGCGCAGC TCCCCGCTCG CGCTCCTCGT GGCCGTCGGG
GCGGTCGTGC TGGCCGTCGC CACCTGCGTC GTGGGGTCCC GCGCACTGAC CACCGCGGTC
GCCCCGCTGC GGGCCACGCG CCGGTTCCGC GAGGTCTCCG GGCTCCTCGG AGCCGCCGTC
GTCGGGCTCG CGATCCTCTT CGGCAACCGG CTGGTCGACG CCGCGGCCGA CGGCGCCAGC
TCCATGTCCG AGGGCTCCCT CGACGCCGTC GCCGACGTCC TCGCGTGGAC GCCCTTCGGT
GCTGCGTGGG GAGTCCCGTC CGCGGTCGTC GCCGGACAGC CGCTCGTCGC GCTCGGCCGG
ACCGTCGTCG CCGTCGCGAC CCTCGTCGCG CTCGTCGCCC TCTGGCGGTG GGCTCTCGAG
CGCACCCTCA CCGGCTCCGC CGCGCAGGCC ACGTCACGAC GGCTCAGCGG GCTCGGGCAC
TTCGCGCGCT TCTCCGGGAC GCCGACCGGG GCCGTCGCGG CACGCTGCCT CACCTACTGG
CGACGCGACC CGCGCTACCT GGGGACGCTC GTCGTCCTGC CGTTCTTCCC CCTGGGGCTC
GGGATCTGGG CCAGCCTCAG CGACCAGGGC TGGTGGGTGC TGCTGCTGCT CGCTCCCCTC
ACCGCCTTCT CCATGGGATG GGCCATCTCC GCCGACGTCT CGTACGACAG CACCGCGTTC
TGGATGCACG TCGTCTCGGG CGTCCACGGC AGGGCCGACC GCCTCGGGCG CGCGATCGCC
GTGTCCGTCC TCGCCGTGCC CGTGATGGTC GTCTACCTGC TCGGAGCCAC CTGGTACCTC
GACCGCTGGG ACACCCTGCC CGCCGTCGCC GGCGTCACCG CCGGGACCTA CCTCACGGGA
CTCGGCGTCT CGAGCGTCGT CTCGGCCCGG TTCGTGTACC CCGTGCCGAA GCACGGCGAG
GGTGCCTTCG CGACGCCCCA GGGCTCGACC ATGTCGACCA TGGCCATCCA GACCGGCGGG
GCGCTCGTGC TCTCCGTGCT CTGCCTCCCG CACGTCGCGC TCGGCATCGC GGCCGTGGTC
ACCGGGAGCG CCGCTCTCGG CTGGGCGACG CTCGTGGTCG GCGTGGCGCT CGGCACCACA
CTGCTGGTGG TCGGCGTGCG CACCGGGTCA CGGCTGTTCG AGGCCCGCAG CGCAGGGCTC
ATGGAGCAGG TCACAGCCCT CGCCTGA
 
Protein sequence
MVAQLVRLRL TLLGNLLKRS AWQIVGFALA ALYGASILLV MVGGLFVLSI DDASTAQAVV 
VAGGSVAVLG WWLLPLVTFG VDSSLDPRKL ALLPIHRRDL LLGLAAAGVV GIPGIVTTIA
SFSSLVVWRS SPLALLVAVG AVVLAVATCV VGSRALTTAV APLRATRRFR EVSGLLGAAV
VGLAILFGNR LVDAAADGAS SMSEGSLDAV ADVLAWTPFG AAWGVPSAVV AGQPLVALGR
TVVAVATLVA LVALWRWALE RTLTGSAAQA TSRRLSGLGH FARFSGTPTG AVAARCLTYW
RRDPRYLGTL VVLPFFPLGL GIWASLSDQG WWVLLLLAPL TAFSMGWAIS ADVSYDSTAF
WMHVVSGVHG RADRLGRAIA VSVLAVPVMV VYLLGATWYL DRWDTLPAVA GVTAGTYLTG
LGVSSVVSAR FVYPVPKHGE GAFATPQGST MSTMAIQTGG ALVLSVLCLP HVALGIAAVV
TGSAALGWAT LVVGVALGTT LLVVGVRTGS RLFEARSAGL MEQVTALA