| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_35840 |
|---|
| Symbol | |
|---|
| ID | 8635217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 4007553 |
|---|
| End bp | 4009373 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003316304 |
|---|
| Protein GI | 269796849 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.6858 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGT ACGTCAAGCG CGCCTTGCGC ACCACGCTGG TCGCCAGCGG TCTGGTGCTC
GCAGGCACAG CAGCAGCCCA CGCAGCAGAC ACAGACGGCA TCGCGAACGG GTCGGAGGTG
ATCGCCCCGG TATCCGTCGG CGTCGACCTC TCGGGCCTGT CGCTCGGGCT CCTGGGCGAC
GCGACCAGCA CGGTCGTCCA GCCCGCCCCG GCAGCTCCGG CAGCACCGGT GGTGGGTGAG
GGCCCTGCGG CCGAGCTCCC GGTCCAGGCG CCCGCGGACG CTGCCCCGGT TACCGAGGGC
ATCGCCAACG GCACCGACGT CACCGCCCCT GTCGCGGTCG ACCTCGACCT CTCCGGCATC
GCCGTGGGTG GGATCGGCGA CGCCGAGTCC ACCGTCGTCG AGGCACCCGC AGCTCCGGCC
CCGGCCCCTG AGGCCGCACC GGCTCCCGAG ACCACCCCGG TCCCGGCACC CGTGACCGAC
GGCATCGCCA ACGGCACCGA CGTCACGGCA CCCGTCGCGG TCGACCTCGA CCTCTCCGGC
ATCGCCGTGG GTGGGATCGG CGACGCCGAG TCCACCGTCA TCGAGGCACC CGCACCCGCC
GCACCGGCAC CGGCACCCGA AGCGCCCGCA CCGGCCCCGG AGACCACCCC GGTCCCCGCG
CCCGTGACCG ACGGCATCGC CAACGGCACC GACGTCACCG CACCGGTCAC CGTCGACCTC
GACCTCTCCG GGATCGCCGT GGGCGTGGTC GGTGACGCGG AGTCCACCGT GGTCGCACCG
ACCACCGGCA CGGCCCCCGC GGCTCCGGCC ACTCCGGCCA CTCCGGTCAC CGGAAGCACG
TCGGGCACCG TGACCGACGG CATCCTCAAC GGCACCGGGG TCCTCGCCCC GGTGGTCGTG
GACCTCGACC TGTCCGGGCT CGCGCTCGGC GTGGTCGGCG ACGCGACCTC GACCACCGTC
GTCGCGCCGT CGCCCGCACC GGGCACCGGT GGCTCCACCC CGACGCCCCC GGCCGAGGGC
ACTCCCGGGA CCCCGGGAAC CACTGACGGC ATCGCCAACG GCACCGACGT CACCGCGCCG
GTCGCCGTGG ACGTCGACCT CTCCGGGCTC GCGCTCGGCG TGATCGGCGA CGCCACCTCG
ACCACCGTGC AGGACGGCAC CGGGACCGCG GCCCCGACCA CTCCCGTCGG CGTCTCGACC
GGCGGTCTGC TCGACGGCCT GCTGAACGAC CTGGGCATCA CCGCCCCGGT CTCCCTCGGC
GTCGACCTCT CCGGGATCGC CGTCGGCGTG ATCGGCGACG CCGAGAGCAC CGTGGTCGTC
CCCGGACAGC CCGTCACCCC GGTCGACCCG ACCGACCCTG TCGACCCGAC GGACCCCACC
GACCCGGTGG ACCCGACGGA CCCGGTCGAC CCGACGGACC CCGTCGACCC GACCGACCCC
ACCGACCCGG TGGACCCGAC TGACCCGGTC GACCCGACCG AGCCTGTCGA CTCGACCGAC
ACCACCGACC CGGTCGACGG CACCGACACC ACCGACCCGA CGACACCGGC CGTCCCGGCC
GGCTCCGGGA TCACCGGCGG CGGCGCCGGT GGCACGATCA CCGTGGGCAC CGACGGCTCT
GCCGTCACCG GCTTCGCTGC CACGGGCTCT GGCGACCGTC AGTCGTCCGC GGTCTCCGGC
TCCGGCTGGA CGGCGCAGGG AGCGCCGACG TCCGAGCTCG CCCACACCGG GACCCAGGCC
CCTGGCCTGC TCGCCCTCAC GGGCCTGCTG CTCCTCGCCG GCCTGGTGCT CCGTCGCACC
GCGCTGCGGG GCAAGGCCTG A
|
|---|
| Protein sequence | MNTYVKRALR TTLVASGLVL AGTAAAHAAD TDGIANGSEV IAPVSVGVDL SGLSLGLLGD
ATSTVVQPAP AAPAAPVVGE GPAAELPVQA PADAAPVTEG IANGTDVTAP VAVDLDLSGI
AVGGIGDAES TVVEAPAAPA PAPEAAPAPE TTPVPAPVTD GIANGTDVTA PVAVDLDLSG
IAVGGIGDAE STVIEAPAPA APAPAPEAPA PAPETTPVPA PVTDGIANGT DVTAPVTVDL
DLSGIAVGVV GDAESTVVAP TTGTAPAAPA TPATPVTGST SGTVTDGILN GTGVLAPVVV
DLDLSGLALG VVGDATSTTV VAPSPAPGTG GSTPTPPAEG TPGTPGTTDG IANGTDVTAP
VAVDVDLSGL ALGVIGDATS TTVQDGTGTA APTTPVGVST GGLLDGLLND LGITAPVSLG
VDLSGIAVGV IGDAESTVVV PGQPVTPVDP TDPVDPTDPT DPVDPTDPVD PTDPVDPTDP
TDPVDPTDPV DPTEPVDSTD TTDPVDGTDT TDPTTPAVPA GSGITGGGAG GTITVGTDGS
AVTGFAATGS GDRQSSAVSG SGWTAQGAPT SELAHTGTQA PGLLALTGLL LLAGLVLRRT
ALRGKA
|
|---|
| |