| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_35800 |
|---|
| Symbol | |
|---|
| ID | 8635213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 4002589 |
|---|
| End bp | 4003446 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein |
|---|
| Protein accession | YP_003316300 |
|---|
| Protein GI | 269796845 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACG AGACCACACC CACGACCACA GACGTCCGGT GGCCCGGAGC CACCTCTGAG
CTCGACCCCG CCCCGGACCA CGGCGAGACG TCGTACACCG GGCACGGGCG CCTCGCCGGG
AAGCGGGCGC TCATCACCGG CGGCGACTCC GGCATCGGCC GCGCCGTCGC CATCGCCTAC
GCCCGCGAGG GAGCCCACGT CGTGATCGGG CACCTGCCCG AGGAGCGCGA GGACGCCGCC
TCGACCCTCG AGCTGGTCCG CGCCGAGGGC GTCACCGGGC TGGGCGTCGA GGTCGACGTC
CGGACGCCCG CCGCCAACGC CGCCCTCGTG CAGCAGGCGG TCGCCGAGGT CGGCGGGATC
GACATCCTCG TCGCGAACGC CGCCTACCAG ATGGCCCAGC CCGGCGGCCT CGAGGACTAC
TCGCCCGAGC AGGTCCAGCG CGTCTACGAG ACCAACGTGT TCGGCACCCT CTGGCTCGTC
CAGGCGGCAC GCCCGCACCT CGAGGCAGGA GCGTCGATCA TCGTGACCAC CTCGATCCAG
GCGTACTCGC CGTCCGAGGC CCTCCTCGAC TACGCCTCGA CCAAGGCCGC GCTCAACAAC
CTCGTCGTCA ACCTGGCGGG CGACCTCGGC CCGGACGGCA TCCGTGTCAA CGCCGTCGCC
CCCGGACCGA TCTGGACACC GCTCATCCCC GCGACCATGC CCGAGGACAA GGTGAAGAGC
TTCGGCCAGG ACACCCCGCT CGGCCGCATG GGCCAGCCCG TCGAGCTCGC CGGCGCCTAC
GTGTTCCTCG CCTCGGACGA CGCGAGCTAC GTCTCGGGCA CCGTCATCGG CGTCACCGGC
GGCAAGCCGG TGTTCTGA
|
|---|
| Protein sequence | MSYETTPTTT DVRWPGATSE LDPAPDHGET SYTGHGRLAG KRALITGGDS GIGRAVAIAY
AREGAHVVIG HLPEEREDAA STLELVRAEG VTGLGVEVDV RTPAANAALV QQAVAEVGGI
DILVANAAYQ MAQPGGLEDY SPEQVQRVYE TNVFGTLWLV QAARPHLEAG ASIIVTTSIQ
AYSPSEALLD YASTKAALNN LVVNLAGDLG PDGIRVNAVA PGPIWTPLIP ATMPEDKVKS
FGQDTPLGRM GQPVELAGAY VFLASDDASY VSGTVIGVTG GKPVF
|
|---|
| |