| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_35580 |
|---|
| Symbol | |
|---|
| ID | 8635191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3977192 |
|---|
| End bp | 3977842 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | heme oxygenase |
|---|
| Protein accession | YP_003316279 |
|---|
| Protein GI | 269796824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACTC TCGCCACCGC CCGCCCCACC CTGTCCAGCC GGCTCCGCGA GGGCACCCGG
GAGGAGCACG AGAGCGCCGA GAGCTCCGGG TTCATCAGCC GCCTCATGTC CGGCGACCTC
GGGACCGACG CGTACGTGTC CCTCGCCTCG CAGCAGTACT TCGTCTACTC GGCCCTCGAG
GCCATCGCCG ACGACGTCCG CGTGCTCCCC CAGGGCGGCT CGCTGATCTT CTCCGAGCTG
ACGCGCACCC CGTCGATCGT CCGCGACCTC GAGCACCTCG TCGGGCCCGA CTGGCAGAGC
AGCGTCCGGG CCCTGCCCGC GACCGAGCGC TACGTCGCCA CGCTGCACGC CAGCAGCACC
TCGCTCCCCC GCTACGCCGC GCACGCCTAC ACCCGGTACC TCGGTGACCT CTCCGGCGGC
CAGATCATCA AGCGGATGCT CGAGCGCCAC TACGGCCTCG GACCCGAGGG CATCACGTTC
TACTCCTTCG AGGAGATCCC CAAGTCCAAG CCCTTCAAGG ACGTCTACCG CGAGCGCCTC
GACACCCTGG AGTTCTCCGA GGACGAGCTC GCCGAGGCCG TCGTCGAGGC CAAGGCGGCG
TTCCGGCTCA ACCAGGACCT CTTCGGGGAG CTCGGCGCAC AGCACTGCTG A
|
|---|
| Protein sequence | MTTLATARPT LSSRLREGTR EEHESAESSG FISRLMSGDL GTDAYVSLAS QQYFVYSALE
AIADDVRVLP QGGSLIFSEL TRTPSIVRDL EHLVGPDWQS SVRALPATER YVATLHASST
SLPRYAAHAY TRYLGDLSGG QIIKRMLERH YGLGPEGITF YSFEEIPKSK PFKDVYRERL
DTLEFSEDEL AEAVVEAKAA FRLNQDLFGE LGAQHC
|
|---|
| |