Gene Sked_34840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34840 
Symbol 
ID8635117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3894876 
End bp3895955 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content72% 
IMG OID 
ProductNADH:flavin oxidoreductase 
Protein accessionYP_003316206 
Protein GI269796751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TCTTCACGCC CACCACCTTC GGTGCGCTCA CCCTCGCCAA CCGCGTCGTC 
ATGGCGCCGC TGACCCGCAT GCGGTCCGGC TCCGAGGGCG TCCCGGGCGA CATCGTCGTC
GAGCACTACG CGCAGCGCGC CTCGGTCGGC CTCATCGTCA GCGAGGGCAC GTACCCGACG
CACGCCGGCC AGGGCTTCGT GGGCCAGCCG GGTCTCGTGA CCGACGCCCA GCTCGCCGGG
TGGCGCCGGG TCACCGACGC CGTGCACGAG CGTGGCGGGC AGATCGTCGC GCAGGTGATG
CACGCCGGCC GTGTGACGCA CCCGGGCATC AACGGCGGCC GCCAGGTGGA AGGGCCCAGC
GCGATCGCGA TCGACGGCGA GACCCACACC CCTGAGGGCA AGGTCGCCTA CCCGGTGCCG
CACGCCCTCA CGGTCGACGA GATCCACGGC ATCACCCAGG CCTTCGTCAC CGCCAGCCGC
AACGCCGTCG AGGTCGGCGG CTTCGACGGC GTCGAGATGC ACTCGGCCAA CGGCTACCTG
CTCCACGAGT TCCTGTCGCC TGCGTCGAAC GTCCGCGAGG ACCAGTACGG CGGCTCGGTC
GAGAACCGCA TCCGCTTCGT GGTCGAGACC GTCACGGCGG TCGTCGAGGC CGTCGGCGCG
GACCGCGTGG GCATCCGCAT CTCGCCCGCG CACAACATCC AGGGCGCGCT CGAGACCGAC
GACGCCGACG TGCAGGCCGT CTACGGCGCG CTCGTCGACG CGCTCGCGCC CCTCGGGCTG
GCGTACCTGA GCATCCTGCA CCGCGAGCCC ACCGGCGCGC TCGTGCGGGA CCTGCGCACG
CGCTTCGGAG GCCCGACCAT CGCGAACTCG GGCTTCGGTG TCATCACCAC GCGGGACGAG
GCGACCGAGA TCGTCGTGGC CGGTCACTCC GACGCCGTGG CCGTCGGCCG CCAGGTCATC
GCCAACCCGG ACCTCGTCCG CCGCTGGCAG GAGGGCCGCG AGCTCAACGA GCTCGACCAG
GCCACCGTCT ACGCCTCCGG TGCCGAGGGC TACACGGACT ACCCGGCGCT CGAGGACTGA
 
Protein sequence
MTDLFTPTTF GALTLANRVV MAPLTRMRSG SEGVPGDIVV EHYAQRASVG LIVSEGTYPT 
HAGQGFVGQP GLVTDAQLAG WRRVTDAVHE RGGQIVAQVM HAGRVTHPGI NGGRQVEGPS
AIAIDGETHT PEGKVAYPVP HALTVDEIHG ITQAFVTASR NAVEVGGFDG VEMHSANGYL
LHEFLSPASN VREDQYGGSV ENRIRFVVET VTAVVEAVGA DRVGIRISPA HNIQGALETD
DADVQAVYGA LVDALAPLGL AYLSILHREP TGALVRDLRT RFGGPTIANS GFGVITTRDE
ATEIVVAGHS DAVAVGRQVI ANPDLVRRWQ EGRELNELDQ ATVYASGAEG YTDYPALED