Gene Sked_34810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34810 
Symbol 
ID8635114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3889974 
End bp3890825 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content66% 
IMG OID 
Productformate/nitrite transporter family protein 
Protein accessionYP_003316203 
Protein GI269796748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATGC CCGACAACGC CTCCCTGTTC CCGGGAAAGC ACTTCATCTC GACGGTCCTC 
TCGGCGCTCG AGACCAAGAC CGCGATGAGC AGCGCGCTGG TCCGCCAGTA CCTCATGCGG
GCGGCGATGG CCGGCGTGAT CATCGGCGTC ATGTACACCG TGAACTTCGC GGTGGTCGCG
GCGTTCCAGG AGGTCGACGA CAGCCTCTAC CAGGTGGGCA AGATCGTCGG GGCGCTGTTC
TTCGGGTGGG CGCTGGTCTT CATCTACTAC AGCAAGTCCG AGCTGCTCAC CTCGAACATG
ATGATCGTGT CGATCGGGCT GTACCACCGG CGCACCAGCG TCGTGAAGGG CCTGCGGATC
CTCGGGCTCT GCTTCCTCGG CAACATCCTC GGCGGCCTGC TGGTCGCCGC ACTGCTGCGG
TTCTCGACGC TGACCAGCGG CGCGGCCGGC GACCTCATGG TCAGCGCCAC CGACCACAAG
GTCGCCTACC TCACGGAGGG CGTCACCGGT TGGACGGACC TGCTGATCCG CGCCGTGCTG
TGCAACTTCA TGATCAACCT CGCGATGCTG CTCGTCTACA ACGGGCTCAT CAAGGACGAT
CTCACCCGGT GCCTCGTCAT GGTGGTGGCC GTGTTCGTGT TCGCCTTCAC CGGCCTCGAG
CACTCCGTGG CCAACACGGT CCTGTTCCTC GTGGTGGGTC TCCAGGGAGG CCTCGACGTC
GGGCTGGCGG CCGGGAACGT GGGCATCGCC CTGCTGGGCA ACCTCGTCGG CGGAGGCCTG
CTCATCGGGC TGTACTACGC CTACCTCAAC GACGACTCCC ACTACCCCGC GGAGAGCACC
ACCAGCACCT GA
 
Protein sequence
MSMPDNASLF PGKHFISTVL SALETKTAMS SALVRQYLMR AAMAGVIIGV MYTVNFAVVA 
AFQEVDDSLY QVGKIVGALF FGWALVFIYY SKSELLTSNM MIVSIGLYHR RTSVVKGLRI
LGLCFLGNIL GGLLVAALLR FSTLTSGAAG DLMVSATDHK VAYLTEGVTG WTDLLIRAVL
CNFMINLAML LVYNGLIKDD LTRCLVMVVA VFVFAFTGLE HSVANTVLFL VVGLQGGLDV
GLAAGNVGIA LLGNLVGGGL LIGLYYAYLN DDSHYPAEST TST