| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_34670 |
|---|
| Symbol | |
|---|
| ID | 8635100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3874289 |
|---|
| End bp | 3875413 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | amino acid ABC transporter membrane protein |
|---|
| Protein accession | YP_003316189 |
|---|
| Protein GI | 269796734 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.220072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCAG CACTCTCCAC CCCACCCTCG ACGGGTAGCC CGGCGTCGCC CCCGCCGGTC
GACCGCTCGA CCGGCCCGGC CCCCTCGGCG CTCCCGCGTG CGACGCGCGC CGAGCTCGAG
TCCCTGCGCG TCGTCGGCGC GCGCCACCCG TGGCGCTACG TCGCGACCGC AGCCGTCGCC
GTCCTCCTCG CGATGGTCGT CAGCTCGCTC GTGACGAACC AGCGCTGGGA GTGGTCGATC
GTCTTCCAGT ACCTCACCTG GCCGTCGATC CTCTCGGGGC TCTGGGGCAC CCTGCGGCTC
ACCTTCGTCG CCGCGGTGAT CGGCTTCGGG CTCGGCACGG TGCTCGCCCT CATGCGGCTG
TCCCGCTCGC CGCTGCTGCG CGCCGTCTCG TGGGCCTACA CGTGGGTGTT CCGGTCCGTG
CCGCTGATCC TCCAGCTGCT GCTCTGGTAC AACCTCGCGT ACCTCTACCC GACGCTCAGC
CTCGGGATCC CCTTCGGGCC GTCCTTCGCG GAGTTCGGCA CCCTCGACGT CATCAACAAG
TTCGGGGCCG CGATCCTCGG CCTCGGGCTC TCGCAGGCGG CGTACTCGGC GGAGATCGTC
CGGGCCGGCA TCCTCAGCGT CGACCAGGGA CAGCACGAGG CCGCCGCAGC CCTGGGCATC
CCGCGGGCAC GGCAGTCCAC CCGCATCGTG CTCCCGCAGG CCATGCGCAC CATCGTCCCG
ACCTCGGTCA ACGAGATCAT CGGCCTCGTC AAGGGCACCT CGGTCGTGTA CGTCCTGGCC
TACGGCGAGC TGTTCTACAC CGTCGGCGTC ATCTACGGGC GCAACCAGCG GGTGGTCCCG
CTGCTCATGG TCGCGGCCAT CTGGTACGTC ATCATCACCA CGGTCATCAC CGTGATCCAG
TTCTACGTGG AACGTCACTA CGCCAAGGGC GCGGTCCGCA CGCTCCCGCC GACACCGATC
CAGGTGGCCC GGTGGACGCT CCTGCGCACC TGGTCGCGCC TCACCGGGCG CCCGCCGCAC
CCGTCGCTCC CGCCCGCCTT CGCGGTGCGG ACCGGCAACG GCCGAGGGCA CCTCACCCGG
ACCGGACGCC CGAGCACGAC CCGCACCGAG GGAGATGCCG TATGA
|
|---|
| Protein sequence | MSSALSTPPS TGSPASPPPV DRSTGPAPSA LPRATRAELE SLRVVGARHP WRYVATAAVA
VLLAMVVSSL VTNQRWEWSI VFQYLTWPSI LSGLWGTLRL TFVAAVIGFG LGTVLALMRL
SRSPLLRAVS WAYTWVFRSV PLILQLLLWY NLAYLYPTLS LGIPFGPSFA EFGTLDVINK
FGAAILGLGL SQAAYSAEIV RAGILSVDQG QHEAAAALGI PRARQSTRIV LPQAMRTIVP
TSVNEIIGLV KGTSVVYVLA YGELFYTVGV IYGRNQRVVP LLMVAAIWYV IITTVITVIQ
FYVERHYAKG AVRTLPPTPI QVARWTLLRT WSRLTGRPPH PSLPPAFAVR TGNGRGHLTR
TGRPSTTRTE GDAV
|
|---|
| |