Gene Sked_34590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34590 
Symbol 
ID8635092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3865125 
End bp3866324 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content76% 
IMG OID 
Productglycine/D-amino acid oxidase, deaminating 
Protein accessionYP_003316181 
Protein GI269796726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0115291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.563037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCGCTGAGAC CGTCGAGACC GTCGTCGTCG GCGGCGGGGT GATGGGGTCG 
GCCGCGGCCT GGGCCCTCGC CTCCGCGGGC CGTGAGGTGC TGCTCCTCGA GCGCTTCGAG
CCCGGGCACG TGCGCGGCGC CTCCCACGGG GCGTCGCGCA TCTACCGCAC CACCTACGCG
GAGCCCGAGT ACCTGGACCT CGCGCAGGAG GCCCTGGGGC ACTGGCGCGC CCTCGAGGCC
GAGGCCGGCG TCGAGCTGCT CACCCTCACC GGTGGCGTCA GCGGAGGAGC GGGCGACGCC
CGCCGAGAGG AGATCGCGGC GGCGTTCGTG GCACGCGGCG TGCCGCACGA GTGGCTCTCC
GCCGAGGCCG CCGCCGAGCG CTGGCCCGGC CTGCGCTTCG ACGGGCGGGT GCTGCACGAG
ACCGAGACGG CGGGCCGCGT GCACGCCGAC CGCGCGGTCG AGGCGTTCCA GGCGGTCGCC
CGCGCTCGCG GTGCGCAGGT CCGGCACTCG ACCGCGGTGC TGGGGCTCGA GACCGCACCG
GGCGGTGTCC GGGTGCTCAC CGACAGCGGT GAGGTGATCG CGCAGCGCGT CGTCGTGGCG
GTCGGGGCGT GGAGCGCAGG GCTCGTGGCG CCGCTGCTCG GTGGCTCGGT GCCGGACGGG
GCGTCCGGGA CACCGCTCCC GCTCGTGGTC ACCCAGGAGC AGCCCGCGCA CTTCGCGCTG
CGCGTCGGTG CGCCGGACGA GCTGTCCTGG CCGAGCTTCA CCAACGACCC CGGTCCGGCA
CTCGTCGGAC CAGGACGGCG CTGGCCGAGC GGCACCTACG GCCTCGCGAC GCCGGGCGAG
GGCATCAAGG TCGGGTTCCA CGGCGTCGGC CCGCGGACCG ACCCGGACCA CCGGAGCTTC
CAGCCCGAGC AGGCGCAGCT CGACCAGCTG CTCGACTACG TGGCCGAGTG GGTGCCCGGC
GTCGACCCGA GCACCGCGGT CCCGATCTCG TGCACGTACA CGACGACGCC CGACCACGAC
TTCGTGCTCG ACCGGGTCGG CCGCGTGACC GTGGCGGCCG GGTTCTCCGG GCACGGCTTC
AAGTTCGCGC CCTCCCTCGG CCGCGTCCTG CGCGACCTCG CGACCGAGGA CGTCGACGGC
CCGGTGGGTG TTGTCGCCGA GCGTTTCCGC CTGGCCCGCC TCACCCGCCC CACCACCTGA
 
Protein sequence
MTETAETVET VVVGGGVMGS AAAWALASAG REVLLLERFE PGHVRGASHG ASRIYRTTYA 
EPEYLDLAQE ALGHWRALEA EAGVELLTLT GGVSGGAGDA RREEIAAAFV ARGVPHEWLS
AEAAAERWPG LRFDGRVLHE TETAGRVHAD RAVEAFQAVA RARGAQVRHS TAVLGLETAP
GGVRVLTDSG EVIAQRVVVA VGAWSAGLVA PLLGGSVPDG ASGTPLPLVV TQEQPAHFAL
RVGAPDELSW PSFTNDPGPA LVGPGRRWPS GTYGLATPGE GIKVGFHGVG PRTDPDHRSF
QPEQAQLDQL LDYVAEWVPG VDPSTAVPIS CTYTTTPDHD FVLDRVGRVT VAAGFSGHGF
KFAPSLGRVL RDLATEDVDG PVGVVAERFR LARLTRPTT