Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_34300 |
Symbol | |
ID | 8635063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3832494 |
End bp | 3834479 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | ATPase component of various ABC-type transport systems with duplicated ATPase domain |
Protein accession | YP_003316154 |
Protein GI | 269796699 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.183589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCA CGAAGAGCCC CAGCGGCTCG ACCCAGGACA CCGCGACCGG GTCGCCGGTG ACCGACGGGC GGTCCGGCGC GACCAGGTCA CCCGTGACCA CCCGGTCGGC TGCGACCCAG ACCGGCAAGA CCCGTGACCA GCCGGCGCGC TCCGGGCCGC TCCTCGTCGT CGAGGGCCTC GAGGTCGCGT ACCGCACGCG TCGCGGCACC GTCCCGGCGG TCCGCGGCGT CGACCTGCAC GTCGACGCCG GCGAGGTCGT GGCCGTCGTC GGCGAGTCCG GCTCGGGCAA GACCACCACC GCGCAGGCGA TCATCGGGCT GCTGCCGCGC GGCGGCGTGC GGACCGCCGG GCGCATCGTG CTCGGCGGGA CCGACATCAG CGCGTGGGGC GACAAGGAGC TCGAGCAGGT CCGCGGTGCC CGCCTCGGCC TCGTGCCGCA GGACCCGACC GTCTCCCTCA ACCCGGTCCG GCGCATCGGC GACCAGGTGG CGGACGTGCT CGTCGTCCAC TCCGGGCTCG CCCGCCGGGC CACGGGGGAG CGGGTCGTCG AGATCCTCGA GCAGGCCGGG CTGCGCGACC CCGAGGCGGT CGCCCGCCAG TACCCGCACC AGCTGTCCGG CGGCATGCGC CAACGGGTGC TCATCGGCAT CGCGCTCGCC TGCCGGCCCG AGCTGGTCAT CGCCGACGAG CCCACCTCTG CCCTCGACGT CACCGTGCAG CGCGCGGTCC TCGACCACCT CGGGTCCCTG ACCGCCGAGC TCGGCACCGC CGTGCTGCTC GTCACCCACG ACCTCGGCGT CGCCGCCGAG CGGGCCCAGC GCGTCGTCGT CATGAACAAG GGGAGGGTGG TCGAGGAGGG CAGCGCCCGG CAGATCCTCG AAGACCCGCA GGACCCGTAC ACGAAGGCGC TCGTCGCCGC GGCGCCGTCG CTCTCGCCGA GCAGGCTGCG GCCGCGGGCG CTGGTGGGGT CGGCAGCGTC GGCTCCTGCA GCGGCGTCGA CCCCGCTGGC TGGGCCGGTC TCGGCTGCCT CGCCGACCGA CGGGGCGAGC GGCCCGGGTG CCTCCGCCGT CTCGCTCGAG CCGGTCGTCG AGGTGCGCGA CCTCGTCAAG GAGTTCTCCG TGCCGCAGCA CGGTGGCGGC AAGAAGACCC TGCGGGCGGT CGACGGCGTG TCCTTCTCGG TCCCGCGCGG CGAGACCTTC GCGATCGTCG GCGAGTCCGG GTCGGGGAAG TCCACCACCG CGCGTCTCGT GCTGCGCCTC GCCGACCCGA CCTCCGGCTC CGTGCACGTC GACGGCCAGG ACATCACCCG GGTGCGCGGC CGACGCCTGC GTCGTCTCCG CGAGCACCTG CAGCTCGTCT ACCAGAACCC CTACGCGTCG CTCGACCCGC GGTTCACCAT CGCGCAGGTG CTCACCGAGC CGCTCGAGGC GTTTCGCGTC GGCGACCGGG CGTCGCGCGC GCGGCGCGCC GCGGAGCTGC TCGACCAGGT GGCGCTGCCG ACGTCGGCGC TCCACCGGCA CCCCGCCGAG CTCTCGGGCG GACAGCGCCA GCGCGTCGCG ATCGCCCGGG CGCTCGCCCT GCACCCGCAG GTGGTCGTCC TCGACGAGCC GGTGTCGGCC CTCGACGTCT CCGTCCAGGC ACAGATCCTC CAGCTGCTCG TCGACCTGCA GCACGACCTC GGGCTCAGCT ACCTGTTCAT CTCGCACGAC CTCGCGGTCG TGCGGCAGAT CTCCGACCGC GTCGGCGTGA TGTCGCGGGG CAGGCTCGTC GAGAGCGGCA CGACCGAGCA GATCTTCGCT GACCCCCAGC ACGAGTACAC GCAGGCGCTG CTCGAGGCGA TCCCTGGTCG CGTCGAGGCT GTCGCCGGTC GCGACGGGGT GTCCCCGCTC GCGACGGGGA GCGGCGCGAC CGCGCGTCTG TGCAGGGAGC CTGACTCTCC GCGACCCATC TCAGCCAGTC ATCACCACCG AGAGGACTCA TCATGA
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Protein sequence | MSSTKSPSGS TQDTATGSPV TDGRSGATRS PVTTRSAATQ TGKTRDQPAR SGPLLVVEGL EVAYRTRRGT VPAVRGVDLH VDAGEVVAVV GESGSGKTTT AQAIIGLLPR GGVRTAGRIV LGGTDISAWG DKELEQVRGA RLGLVPQDPT VSLNPVRRIG DQVADVLVVH SGLARRATGE RVVEILEQAG LRDPEAVARQ YPHQLSGGMR QRVLIGIALA CRPELVIADE PTSALDVTVQ RAVLDHLGSL TAELGTAVLL VTHDLGVAAE RAQRVVVMNK GRVVEEGSAR QILEDPQDPY TKALVAAAPS LSPSRLRPRA LVGSAASAPA AASTPLAGPV SAASPTDGAS GPGASAVSLE PVVEVRDLVK EFSVPQHGGG KKTLRAVDGV SFSVPRGETF AIVGESGSGK STTARLVLRL ADPTSGSVHV DGQDITRVRG RRLRRLREHL QLVYQNPYAS LDPRFTIAQV LTEPLEAFRV GDRASRARRA AELLDQVALP TSALHRHPAE LSGGQRQRVA IARALALHPQ VVVLDEPVSA LDVSVQAQIL QLLVDLQHDL GLSYLFISHD LAVVRQISDR VGVMSRGRLV ESGTTEQIFA DPQHEYTQAL LEAIPGRVEA VAGRDGVSPL ATGSGATARL CREPDSPRPI SASHHHREDS S
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