| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_34200 |
|---|
| Symbol | |
|---|
| ID | 8635053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3820590 |
|---|
| End bp | 3821930 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | glutamate dehydrogenase (NADP) |
|---|
| Protein accession | YP_003316145 |
|---|
| Protein GI | 269796690 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.255605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG GACAGCTCGC GCCCGTGCTC GACGAGGTGC TGCGACGCAA CCCCGGCGAG
GCCGAGTTCC ACCAGGCGGT GCGCGAGGTC TTCGAGTCGC TCGCACCGGT CCTGGCCAAG
AACCCGCAGT ACGCCGACGC CGCGGTCCTC GAGCGCATCT GCGAGCCCGA GCGTCAGATC
ATCTTCCGGG TGCCGTGGGT CGACGACGCC AACCGCGTGC AGATCAACCG CGGCTTCCGC
GTCGAGTTCA ACTCCGCCCT CGGCCCCTTC AAGGGCGGCC TGCGGTTCCA CCCCTCGGTG
TACCTGGGCA TCGTCAAGTT CCTCGGCTTC GAGCAGGTGT TCAAGAACTC CCTCACCGGC
ATGCCCATCG GCGGCGGCAA GGGCGGGTCC GACTTCGACC CGCGCGGCCG CTCGGACGGC
GAGATCATGC GGTTCTGCCA GTCCTTCATG ACCGAGCTGT ACCGGCACAT CGGCGAGTAC
ACGGACGTGC CCGCCGGTGA CATCGGCGTC GGCGGCCGCG AGATCGGCTA CCTCTTCGGC
CAGTACAAGC GCATCACCAA CCGCTACGAG TCCGGCGTGC TCACCGGCAA GGGCATCAGC
TGGGGCGGGT CGCTCGTGCG CACCGAGGCC ACCGGCTACG GCACCGTGAT GTTCGCCCGC
GAGATGCTCA AGACGCGTGG CCTCGAGCTC GAGGGTCAGC GCGTGGTGGT GTCCGGCTCC
GGCAACGTCG CGATCTACGC CATCCAGAAG GCCCAGCAGC TCGGCGCGAC GGTCGTCGCC
TTCTCCGACT CCTCGGGCTA CGTGGTCGAC GAGGCCGGGG TCGACCTCGA CCTGCTGCGC
CAGATCAAGG AGGTCGAGCG CGGGCGCGTC GACCTCTACG AAGAGCGTCG CGGGTCGGCG
AAGTTCGTCG CGGGCGGCAG CATCTGGGAC GTCCCCGCGA CGGTCGCGCT GCCCTGCGCG
ACGCAGAACG AGCTCGACGA GTCTGCCGCG CGCACGCTCC TGACCAACGG TGTGATCGCG
GTCGCCGAGG GCGCCAACAT GCCCGCGACG CCCGAGGCCG TCGCCGCCTT CCAGGAGGCC
GGGACGCTCT TCGCCCCCGG CAAGGCTGCG AACGCCGGCG GCGTCGCGAC GTCCGCGCTC
GAGATGCAGC AGAACGCGAG CCGCGACTCG TGGACCTTCG AGCACACCGA GGCCCGCCTC
GAGGGCATCA TGACCGGCAT CCACGACCGC TGCGCCGAGA CCGCCGACGC CTACGACCGT
CCCGGCAACT ACGTGGCCGG CGCCAACATC GCGGGCTTCA CCAAGGTCGC CGACGCGATG
ATCGCCCTCG GGGTCGTCTG A
|
|---|
| Protein sequence | MIDGQLAPVL DEVLRRNPGE AEFHQAVREV FESLAPVLAK NPQYADAAVL ERICEPERQI
IFRVPWVDDA NRVQINRGFR VEFNSALGPF KGGLRFHPSV YLGIVKFLGF EQVFKNSLTG
MPIGGGKGGS DFDPRGRSDG EIMRFCQSFM TELYRHIGEY TDVPAGDIGV GGREIGYLFG
QYKRITNRYE SGVLTGKGIS WGGSLVRTEA TGYGTVMFAR EMLKTRGLEL EGQRVVVSGS
GNVAIYAIQK AQQLGATVVA FSDSSGYVVD EAGVDLDLLR QIKEVERGRV DLYEERRGSA
KFVAGGSIWD VPATVALPCA TQNELDESAA RTLLTNGVIA VAEGANMPAT PEAVAAFQEA
GTLFAPGKAA NAGGVATSAL EMQQNASRDS WTFEHTEARL EGIMTGIHDR CAETADAYDR
PGNYVAGANI AGFTKVADAM IALGVV
|
|---|
| |