Gene Sked_33890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33890 
Symbol 
ID8635022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3790718 
End bp3791641 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content73% 
IMG OID 
Productpredicted HAD superfamily hydrolase 
Protein accessionYP_003316117 
Protein GI269796662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.531552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.935402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCTCGA CCGGGCTGCG ACGACCGGTG CTCGCGGCGA GCGACCTCGA CCGGACGCTC 
ATCTACTCCG GCAAGGCCGC CAAGCTCGGC CTCCCGCCGG GGACCAGGCT CCGCGACAGC
GCGCTCTACG AAGACCTCGT CTGCGTCGAG ATGTACGACC ACAAGCCGCT GTCGCACGTG
ACCCGGACCG CGCTCGCGTC GATCACCCGG CTGGCCGAGC TCGGCGTGCT CGTGCCGGCC
ACCACCCGTA CGCGCGCCCA GTACCGGCGC ATCTCCCTTC CCGGACCGCC CGTGCCGTAC
GCGATCACCG CCAACGGCGG GTTCCTGCTC GTCGACGGCG AGACCGACGA CGACTGGACC
CGGCAGGTCG AGCGCGAGCT CGCCGCCTCC TCGCACCCCT TCGCCGAGGT GCAGCAGTAC
ATGGCCGACA CGTTCCGGCC CGAGTTCACC TCGAAGCTGC GCAACGCCGA AGAGCTCTTC
TGCTACGCGG TCGTCGACCG TGACGCGCTG CCCGAGGGCT TCGTCGCGGA GGTCTCCGCC
TGGGCCGAGG CGCACGGGTG GCGCGCGTCC CTGCAGGGAC GCAAGCTCTA CGTCGTGCCC
GTCGGTCTCC GCAAGGGAGC AGCCGTCGCC GAGGTCGCCC GCCGGGTCGG CGCCGAGACC
GTGCTCGCCG CGGGCGACTC GCTGCTCGAC GCCGAGATGC TCGAGTCCGC GACCCGGGCC
GTGCGGCCGG CTCACGGCGA GCTGCACGAG GTGGGGTGGC AGACGGAGGG TCTGGTCGTC
ACCGCGACCG CCGGGGCGAC CGGCGGTCAG GAGGTCGCGC AGTGGCTGCT CGACGAGACG
CTCGCCGTCC TCGACGGGGC TGTGGAGGCT CCCGACGGCG CAGGTGCCGC TCCTGGCGGT
GCAGCAGAAG CGCGTCACCT GTGA
 
Protein sequence
MVSTGLRRPV LAASDLDRTL IYSGKAAKLG LPPGTRLRDS ALYEDLVCVE MYDHKPLSHV 
TRTALASITR LAELGVLVPA TTRTRAQYRR ISLPGPPVPY AITANGGFLL VDGETDDDWT
RQVERELAAS SHPFAEVQQY MADTFRPEFT SKLRNAEELF CYAVVDRDAL PEGFVAEVSA
WAEAHGWRAS LQGRKLYVVP VGLRKGAAVA EVARRVGAET VLAAGDSLLD AEMLESATRA
VRPAHGELHE VGWQTEGLVV TATAGATGGQ EVAQWLLDET LAVLDGAVEA PDGAGAAPGG
AAEARHL