| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33880 |
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| Symbol | |
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| ID | 8635021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 3788400 |
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| End bp | 3790583 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | small-conductance mechanosensitive channel |
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| Protein accession | YP_003316116 |
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| Protein GI | 269796661 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.415466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.49587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGACGC TCGCCGTCGC CGCCGCAGCG GTCGTCGTCG CCTACGTCCT GGGGACGATC
GTGTCGATCG TCGTGCGCCG GGCCGGGCGT CGCAACGAGT TCGTGCGCGA CGTGTCGCAC
CGCATGCGCC GCCCGCTGCG CGCCGTCCTC ATCGTCCTCG CGCTCCTCGT GGCGCTGCGG
GTGACCACGA GCGACGCCGA CGGGTGGACC GCCGGTGCCG AGCACCTGCT GCTGATCGTC
GGCATCGGGG TCGGGGCGTG GTTCGTCGGG GCCCTGGCGT TCGTCGTCGA GGACAGCGTC
CTCAAGCAGT TCCGCACCGA CGTCGTCGAC AACCGGCACG CACGCCGCGT CCGCACCCAG
ATCGTCGTGG TGCGACGGGT GACCGTCGCC CTGGTGGTCA TCTGCGCCAT CGCCGCGATG
CTCTTCACCT TCCCGGCTGC ACGCACCGCA GGGACCAGCC TGCTCGCGTC GGCCGGTCTC
ATCTCGATCG TCGCCGGTCT CGCCGCGCAG ACCGCCCTCG CCAACGTCTT CGCGGGGATG
CAGATCGCCT TCACGGACGC GATCCGTGTC GACGACGTCG TGGTCCTCGA GGGGGAGTGG
GGTCGCATCG AGGAGATCAC CATGACCTAC GTCGTGGTGC ACCTGTGGGA CGACCGGCGG
CTCATCATGC CCTGCACGTA CTTCACGAAC ACGCCGTTCC AGAACTGGAC GAGGCGTGCC
GCCGAGCTGC TCGGCACCGT CGAGATCGAC CTCGACTGGG ACGTGCCCGT CCCGGCGATG
CGCGCCGAGC TCAAGCGGCT CCTCGAGGCG TCGCCGCTGT GGGACAAGCG CGTGGGGATC
CTCCAGGTCA CCGACGCGAC CAACGGCTAC GTCCGGATGC GCGCCCTCGC GAGCGCCGCC
GACGCCGGGA CGCTGTTCGA CCTGCGCTGC TACGTCCGCG AGGGCCTGGT CGACTGGCTG
CAGCGCGCCG CGCCGCAGGG CATGCCGCAC ACCCGTCTGT CCACGAGCGA CGGGAAGGTC
CGCGCCGCCC TCGAGGCCGC ACCCGGCGAC GCCCCGGCCC ACGACCTCGC CAAGTCCCCG
GTGCGGTCCG GTGTGCTCGA CTCGCTCTTC GACGAGGAGC GCTACGGCAA CGAGCGTGAC
AAGCCCTCCG TCACCGCCGA ACCCGACCTG CCGCGCCGCA TCGCCGCCCG CTCGACGCGG
CCGGGCGTCC GCATGCACCT GTCCGAGCCC GCGCGCGGGT TCCACACGGC CCCGGCCGTG
CCGTCGTCCG AGGACGAGAC CACCCTGCTG GGCAAGGTCG GCGCCGACGG GACGCCGGTC
GACGTCGTCG TCGAGCCGTC CGAGGACGCG ACGATGGCCT GGGGGACCAG CGAGGGGCTG
TTCACCGGGA GCGAGGCCGC CGTCGAGCGG TCCAAGGCCT TCTCCGGACC TGGCCAGGAG
GTCATCGACG AGCGCGAGCG CACCGCGCTG CTCGACGCCG TCGACGACGA GGGCACGGAC
GGCACGACCG AGGGCGACTC CGACGACGAC GAGGCTCCCG CCGAGCGCGA GCGCCGCTTC
GCCGGGCACC CCTCGGCAGG CAGCGCGGCT GCCGAGCAGG CGGTGCCGGA GGAGGACGGT
GCGACGGCCG AGGCCGAGGC GGCGGCTGAG CCCGCTGCGG CTGTGTCCGC TGAGCCCGCT
GCGCCCGGTG GGGATGCGTC GGTTGAGTCC GACCGCGTTC TCGGGGCGAC CGACGTCAGG
GCTTCTGGCG GCGACGGGGC GTCGCACGAC GACCAGGTCG GCCGCGACGA CCGGAACGCC
GGCGGTGAGG AGACCACCGT CGTCGGCTCC GAGGGGCCCG GGGCGCCGGA GCCGAGCGAG
CGTTCTGGCG CGACCCGCGT CCAGCCCCCG CTGCCTGTGC CGCCGCCGCC TGCGGACGTG
CCGAGCGCCG CACCGCGGCG CGCGCTCGTC GAGGACGAGA GTGCTGCCCC GGTGCCCGGG
GCCCAGGCTC CCGAGGAGCC GCCGTCCGTG ACGCGGACGG GTGTGCTGCG CCGGACGCCG
CGGGCCGGCG CCCACACCGA GGCGCCGGAG CCCGAGCAGA CGGCTCGGCT CCCGCGTGTC
ACGGAGGACC TCCCGCCGGG TGCCACCGAG GAGACGACCC GGATCCCCCG CGTCGACGAC
GACGGCGAGC CCCGGACGAG CTGA
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| Protein sequence | MVTLAVAAAA VVVAYVLGTI VSIVVRRAGR RNEFVRDVSH RMRRPLRAVL IVLALLVALR
VTTSDADGWT AGAEHLLLIV GIGVGAWFVG ALAFVVEDSV LKQFRTDVVD NRHARRVRTQ
IVVVRRVTVA LVVICAIAAM LFTFPAARTA GTSLLASAGL ISIVAGLAAQ TALANVFAGM
QIAFTDAIRV DDVVVLEGEW GRIEEITMTY VVVHLWDDRR LIMPCTYFTN TPFQNWTRRA
AELLGTVEID LDWDVPVPAM RAELKRLLEA SPLWDKRVGI LQVTDATNGY VRMRALASAA
DAGTLFDLRC YVREGLVDWL QRAAPQGMPH TRLSTSDGKV RAALEAAPGD APAHDLAKSP
VRSGVLDSLF DEERYGNERD KPSVTAEPDL PRRIAARSTR PGVRMHLSEP ARGFHTAPAV
PSSEDETTLL GKVGADGTPV DVVVEPSEDA TMAWGTSEGL FTGSEAAVER SKAFSGPGQE
VIDERERTAL LDAVDDEGTD GTTEGDSDDD EAPAERERRF AGHPSAGSAA AEQAVPEEDG
ATAEAEAAAE PAAAVSAEPA APGGDASVES DRVLGATDVR ASGGDGASHD DQVGRDDRNA
GGEETTVVGS EGPGAPEPSE RSGATRVQPP LPVPPPPADV PSAAPRRALV EDESAAPVPG
AQAPEEPPSV TRTGVLRRTP RAGAHTEAPE PEQTARLPRV TEDLPPGATE ETTRIPRVDD
DGEPRTS
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