Gene Sked_33870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33870 
Symbol 
ID8635020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3787637 
End bp3788323 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003316115 
Protein GI269796660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.355223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.49339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT CCGTGTTCGC GCAGGCCCTC GGCAGCGACG TCGAGCGCCT GCACCCGCAG 
ATGCGTCGGC GCTTCGGCCT CACCCCGGAC GGCGAGAACG CCTGCGTCGG GCGCGGGGTG
ATGGACGAGG TGTGGCGCGG GCCGCTGGCC ACGGTCCCGT TCCTGTGGTT CGGGGCCTGG
CGGAACATCC TGGTCCCCCG GACCGGCAGG GGCGTCCCGT TCACCATCGA GAACTACTGC
TACGTCGACG GGCTCGGTCG GGACACCACG ACCTTCGTGC GGACCTTCGA GTTCCCGCGC
GGCCGGCGCA GCCGCTTCGA CGCGACCATG GTGTACGACG CGCAGGCCGG CAGGGTCCTC
GACTACCTCG GCACGCACCA GCACCTCGCG GTCGACCTCG ACCTCACCGT CGACGAGCGC
GGCGGGCTGC TGCTGCGCTC CGGCGCGCAG CGGTTCTACG AGGGCCCCGT CGGCTTCTCG
TTCCCCATGG TCGCCTCGGG CACCGCCGAG CTCCACGAGC ACTTCGACGA CGCGACCGGC
CGGTTCCACG TGGACCTCAC CGTGTCCAAC CCGCTGGTCG GGCCGATCTT CGGGTACCGG
GGGTCTTTCA CCTGCGACTT CACGACGTTG CCGGCGACGT CCGTCCCTGC GTCGGCCAAG
CCGCTGCGCG AGGAGCGCCG AGGCTGA
 
Protein sequence
MTTSVFAQAL GSDVERLHPQ MRRRFGLTPD GENACVGRGV MDEVWRGPLA TVPFLWFGAW 
RNILVPRTGR GVPFTIENYC YVDGLGRDTT TFVRTFEFPR GRRSRFDATM VYDAQAGRVL
DYLGTHQHLA VDLDLTVDER GGLLLRSGAQ RFYEGPVGFS FPMVASGTAE LHEHFDDATG
RFHVDLTVSN PLVGPIFGYR GSFTCDFTTL PATSVPASAK PLREERRG