| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33580 |
|---|
| Symbol | |
|---|
| ID | 8634991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3759557 |
|---|
| End bp | 3760711 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | putative peptidoglycan binding protein |
|---|
| Protein accession | YP_003316087 |
|---|
| Protein GI | 269796632 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.10172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCTC GCACCGAGAG GCCGCCGCCA CCAGCGCCAC GGACCCGACT CTTCCGCGCT
CTGGCCTTCA CCGCGCCGCT CGTCGCGCTC TGGCTCGTGC CTGTGCTCGC ACTGGCCGTC
GTGGTGCCGC TCGCCACGTC ACGGGAGGCC TCGTCGGTCG AGTCAGAGCT GCCGGTCACG
GCGACGGTCG GGTCGCGGGA GGACGACTAC CGCCAGACCG TCACCGCCAC GTTCCAGGTC
ACGGCCCCCC ACGACGTCGT CGTCCCGGCG GCCGGGCTCG TCACCGCGGT GCACGCGTCG
CCCGGGCAGG TGCTGGCCCC GACCGACGCG GTGGTCTCCG TCGACGGCGC GGTGCTGCGC
GCTCACGTGG CCGAGGCGCC GCTCTACCGC GAGATCGGCC CGGGCACGTC CGGCGCCGAC
GTCGAAGGGC TGCGTGACTA CCTGGCAGCC GCAGGGTCGG AGACCACGCT CGGGCGAGGC
GCGTCGTACA GCCCGAGCCT GCGGCGCGCG ATCACCGCGT ACCAGCGCGC CAACGGGTTC
CCCGCGGACG GGGTCTTCCA GCCGTCGTCC GTGGTGTTCG TCCCTGCCGG GTCGCCGTCC
GTGCAGTCGG TGCTGACGTC GGTCGGGGAG ATGGTGGCCC TCGGTGACCC GGTGATCGCC
GGGCCGGTGC TGCCGCTCTC GCTCACCCTC AGCGCCGAGT CGACGCTCCG GCTCGCCGGC
AAGGACGGAC CGTTCGCCCT CCTGCTCTCC GACGAGGAGG TCCCCGTAAC CTCCCTGGCG
CCGGCCCCCG AGGAGGTCCA CGCGCTCCAT GCCGCCCTCG TCTCTGCGGC GGAGCGCGGC
ACGGTCGACC TGACCACCGA CGACACCACG CAGTCCTTCA CCGGCCTCGT GCTCCACCTG
CCCGACGCAC CCGTGCGCGG CACCGTGCCC ACCACCGCCG TCTACACCAC GGCAGCCGGC
ACGCGGTGCG TGTTCAGCAC GGACGAGACG CGCAGCACCG GCGTCGTCAC CTCCGCCGAT
GCGATCCCGC TGACCGACGC GACCACGGTC GACGGCGAGA TCGGCCTCGC CTCCGTCCCC
GCGGACCTGG TCGGCCAGAC CGTCGTCCGC AACCCCCGGT CGCTCCCCGG CTCCGTGCTG
GACGACTGCG CATGA
|
|---|
| Protein sequence | MRSRTERPPP PAPRTRLFRA LAFTAPLVAL WLVPVLALAV VVPLATSREA SSVESELPVT
ATVGSREDDY RQTVTATFQV TAPHDVVVPA AGLVTAVHAS PGQVLAPTDA VVSVDGAVLR
AHVAEAPLYR EIGPGTSGAD VEGLRDYLAA AGSETTLGRG ASYSPSLRRA ITAYQRANGF
PADGVFQPSS VVFVPAGSPS VQSVLTSVGE MVALGDPVIA GPVLPLSLTL SAESTLRLAG
KDGPFALLLS DEEVPVTSLA PAPEEVHALH AALVSAAERG TVDLTTDDTT QSFTGLVLHL
PDAPVRGTVP TTAVYTTAAG TRCVFSTDET RSTGVVTSAD AIPLTDATTV DGEIGLASVP
ADLVGQTVVR NPRSLPGSVL DDCA
|
|---|
| |