Gene Sked_33510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33510 
Symbol 
ID8634984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3748480 
End bp3749511 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content76% 
IMG OID 
ProductNTP pyrophosphohydrolase 
Protein accessionYP_003316080 
Protein GI269796625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0185046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTCG ACGCCCCGAC GACCCCTCCG TTCCGGGTCC GTGGGGCCAC CGGCGTGAGC 
GACACGGCGA CGGACAAGAC ACCGGTCATC GAGTCGGCCG GGGCGCTCGT CTGGCGGGTC
CGCGACGAGC GGCTCCAGGT GCTGCTGATC CACCGGCCGC GCTACGGCGA CTGGTCGTGG
CCCAAGGGCA AGCTCGACCC GGGCGAGACG CTGCCGACGG CCGCGGCCCG CGAGGTCGCC
GAGGAGACCG GGCGCCCCGT GACCCTCGGC CTGCCGCTGC CCGGCCTGCA GTACCTGACC
CCGGACGGCG CCGTGAAGCG CGTGCACTAC TGGGCGGCGA CGACGGGGGC GGTGGCCCCG
GCCCTCGCGG CCCGCGCCCC GGTGCCCCCG GTCGACCCGG CTGAGATCGA CGCCAAGAAG
TGGATGGACG TCGACGCCGC CCGGGCGGCA CTGACGCGCA CCGCCGACCG CATCCCCCTC
GCGGCGCTCG TCGCCGAGCA CGAGAAGGGT CGGCTGGCGA CGACGGCGCT GGTCATCGCG
CGGCACGGCA AGGCACAGGG CAGGTCCTCG TGGCACGGGA CGGAGACGGA CCGGCCGCTC
ACGCCCACCG GGCACGCGCA GTCCGCGGCG CTCGTCCCGG TGCTGGCCGC CTTCGGGATC
AGCACGGTCG TCACCAGCCG GTGGCGACGC TGCTCGGAGA CCATGGCGCC CTACGCACGG
GCGGCGTGGC TCGACACCGA GTCGAACGAG CACCTCACGG AGAGCGACCA CGAGCGCTCG
CCGGGCCGCG TCGCGGCCGT GGTCCGGTCG CTGCTCGAGT CGGCCGAGCC GACGGTGCTG
TGCACGCACC GCCCGGTGCT GCCCACGGTC CTCGACGTCC TCGGGCAGCA CTCGCGCCGC
TCGGTCGCCT CCGCGCTGCC CACCAAGGAC CCGTTCCTCG AGCCGGGCGA GATGCTCGTG
ACGCACGTGA CCCAGACGGC CAAGGGCCCG CGCGTCGTCG GCGTGGAGCA CGTCCGCCCG
CCCCTGCACT AG
 
Protein sequence
MRVDAPTTPP FRVRGATGVS DTATDKTPVI ESAGALVWRV RDERLQVLLI HRPRYGDWSW 
PKGKLDPGET LPTAAAREVA EETGRPVTLG LPLPGLQYLT PDGAVKRVHY WAATTGAVAP
ALAARAPVPP VDPAEIDAKK WMDVDAARAA LTRTADRIPL AALVAEHEKG RLATTALVIA
RHGKAQGRSS WHGTETDRPL TPTGHAQSAA LVPVLAAFGI STVVTSRWRR CSETMAPYAR
AAWLDTESNE HLTESDHERS PGRVAAVVRS LLESAEPTVL CTHRPVLPTV LDVLGQHSRR
SVASALPTKD PFLEPGEMLV THVTQTAKGP RVVGVEHVRP PLH