Gene Sked_33470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33470 
Symbol 
ID8634980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3740607 
End bp3743942 
Gene Length3336 bp 
Protein Length1111 aa 
Translation table11 
GC content73% 
IMG OID 
ProductNAD-dependent aldehyde dehydrogenase 
Protein accessionYP_003316076 
Protein GI269796621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.989861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCT CTCTCACTCA GCTCACGGAC GACGCCGCCA CCCTGGCGCG CACGTGGATG 
GCGGCCACAG CCGCTGGTCA GACAGCGGCA GAGCGCCGCA CCACCCACCG CCTCGCGCAG
CTGGTCTCCG ACCCTGCCGG CCTCGAGTTC GCCGTCCGGT TCGTCGACCG GGTGGCCCGT
CCCGACGACC TCCAGGTCGC CGCCCACGAG CTGGCCGAGC TCCGCTCCGT CGCCTCGGCA
CCGGGAGCGT TCCTCAACCC CGTCGACAGG CTGCTGGTCA CCGCCGGCAC CATCGCAGCA
CCGTTGCTGC CCGGTGTCGT CGTCCCCGCC GCGCGGACCC GGCTGCGCCA GCTCGTCGGG
CACCTCGTGG TCGACGACGG ACCACGCCTG GCCAAGCACA TCGCCAAGGC CACGGCCGAC
GGCTTCCGCC TCAACATCAA CCTGCTCGGC GAGGCCGTCC TCGGCCAGCA GGAGGCCGGC
CACCGTGCCG AGCGCATCCT CGCGCTCATC GCCCGCCCCG ACATCAGCTA CGTGTCGGTC
AAGACCTCGG CCGTCGTGTC GCAGCTGTCC ACCTGGGACA CCGCGGACAG CACGGAGCGC
GTCCTCGAGA CCGTCCGCCC GCTGTACCTC GCGGCCAAGG AGCGCGGCAC CTTCATCAAC
CTCGACATGG AGGAGTACCA CGACCTCGAC CTCACGGTCG CGGTGTTCCT GCGGCTCATG
GAGGACCCGG AGCTGCTCGG CCTCGAGATG GGCATCGTGC TGCAGGCCTA CCTGCCGGAC
TCGGGCGCGG CGCTCGACGT CCTCACCGAG GCCGCGACGG CCCGTCGCAC CGCGGGCGGC
GCACGCGTCA AGGTGCGTCT CGTCAAGGGC GCCAACCTCG CCATGGAGAA GGTCGACGCC
GAGCTGCACG GCTGGGAGCA GGCGCCGTAC GACACCAAGC CCGACGTCGA CGCCAACTAC
GTGCGCGTCC TCGACCGCGC GCTCGACCCG GCGCGGACCG ACGCGGTGCG CATCGGCGTC
GCCAGCCACA ACCTCTTCGA CGTGGCGCTG GCGCACCTCA TGGCCTCCGA CCGCGGCGTG
AGCGAGGCGC TCGACGTCGA GATGCTCCAG GGCATGGCCC CGGCGCAGGC GCGTGCCGTG
CGTGACGCCG TCGGCCAGGT GGTGCTCTAC ACGCCCGTCG TGGCCAAGAA GGACTTCGAC
GTCGCGGTCT CGTACCTCGT GCGCCGCCTC GAGGAGAACT CGGCCTCGCA GAACTTCGTG
CACGCCCTGT TCGCCGGTGA CGAGACCTCG GGCGAGCACG CCGAGGGCGG CACGCCGATG
GACCACCAGG AGCAGGCGTT CCGCGACTCG GTCGCCGCGA GCGAGACGGT CTCGACGACG
CCTCGCCGTG CCGAGCGCCC TGCCCCCGCG ACGCTCGTCG CGGGCCAGCC CTTCGTCAAC
GCGCCCGACA CCGACCCCGC GGTCGAGTCG GCGCGTGCCT GGGCGCACGT CGTCGTGTCC
CCCGAGACCG CCGCACGGCT CGCCGCGTCG GTCCCGGAGG CGACCGTGCT GGCCGTCCCC
GCCGACGTCG ACTCCGTCGT CGCCCGGGCC GCCGAGGTCG CGGGCACGTG GCGCGCCACG
ACCGGCGCCC AGCGCCGGGA GGTGCTCCTC ACGGCAGCCC GCCTGCTCGA GGAGGCTCGG
ACGGACCTCG TCGGCACCAT GGTCCACGAG GCCCGCAAGA CCGTCGGCGA GGCCGACCCC
GAGGTCAGCG AGGCCGTCGA CTTCGCCGCG TTCTACGCGG AGTCTGCCGC GCAGCTCGAC
GAGGTGCCCG GCGCGACCTT CACGCCCGAG GGGCTCACCG TGGTCACACC GCCGTGGAAC
TTCCCGGTCG CGATCCCGCT CGGCTCGGTC CTCGGCCCGC TCGCCGCCGG CTCCCCCGTG
ATCATCAAGC CGTCGCACGT GACGCCGCGC TGCGCGGCCG TCGGTGTCGA CGCGATCCGG
CGCGCGCTCG TCGAGCACGG CTACGAGGCA GACCTCGTGC AGCTGGTCTC GGCCGACGAG
GGCGAGGTCG GGCGTCGTCT CGTCACGCAC CCGGAGGTGT CGCGCGTGGT GCTCACCGGC
TCGATCGAGA CGGCCGAGCT CTTCGCGGGG TGGCGCCCCG ACCTGCACGT CTTCGCGGAG
ACGTCGGGCA AGAACACGCT CGTCGTGACC GCGGCGGCCG ACATCGACCT CGCGGTCAAG
GACATCGTGC GCTCGGCCTT CGGCCACGCC GGGCAGAAGT GCTCGGCGGC GTCGCTCCTC
GTCCTCGTCG GCGCCGTCGG GCGCTCCGCC CGTCTGCACC GCCAGCTGGT CGACGCCGTG
CGGTCCCTGG CCGTCGGACC CGCGACCGAG CTCGCGACCA CCACGGGTCC GCTCACGGTC
GAGCCGGGCG AGAAGCTGCA CCGTGCGCTG ACGACCCTCG ACGAGGGCGA GCGCTGGGTG
GTCGAGCCGC GCGAGGTCCC CGGGACCGAC CACCTGTGGA CGCCGGGCGT CAAGGCAGGC
GTCCAGCCCG GCTCGTGGTT CCACCTCACC GAGGTGTTCG GCCCCGTGCT GGGTATCGTC
CGTGTCGACA CGCTCGACGA GGCGCTCGAG GTGCAGAACG CGGTGTCCTT CGGCCTCACC
GGTGGGATCC ACTCCCTCGA CGAGGCGGAG ATCGCGCACT GGCTCGAGAA CGTCCAGGTG
GGCAACGCGT ACATCAACCG CCACATCACC GGGGCGATCG TGCAGCGCCA GCCCTTCGGC
GGGTGGAAGG CGTCGGTCGT CGGACCGGGT GCCAAGGCCG GCGGCCCGAG CTACGTCGCG
CAGTTCGGCG ACTGGTCGGA CGACGCCTCC GTCCCCGACC GCACGTCCGC ACCGGAGGAG
TGGCTCGCGT GGGCCGCGGC CGACGACGCG GCGTGGTGGG AGCGCGAGAT GGGCGTCGAG
CACGACCCGA CAGGTCTCGA CTCGGAGTCC AACGTGCTCC GCTACCGCCC CGTCCCGACC
CTCACGGTGC GCGTCGCGGC CGACGCCGTC GACATCGAGG CCGACCGCGT GCTGCACGCG
GCGTCCGTGG CGGGCGTGCC GGTCACGGTC AGCTCGGCCG AGGTCGAGGA CGCCGCGGCC
TTCGCCGCGC GCGTCGCCGC GGGCGAGGTC GAGGGGCGCA TCCGCGTCGT CGGCTCCGAG
CCTGGTCTCC GCGAGGCGGC CGCGTCGCAC GTCGGGTCGG TCACCGTGCT CGACGCACCT
GTCGTCGCGA GCGGTCGTCG CGAGCTCATG ACGGTGGTCC GCGAGCAGGC AGTGTCCCAG
ACCCGCCACC GCTACGGGCA CCTCGAGCGC GGCTGA
 
Protein sequence
MSLSLTQLTD DAATLARTWM AATAAGQTAA ERRTTHRLAQ LVSDPAGLEF AVRFVDRVAR 
PDDLQVAAHE LAELRSVASA PGAFLNPVDR LLVTAGTIAA PLLPGVVVPA ARTRLRQLVG
HLVVDDGPRL AKHIAKATAD GFRLNINLLG EAVLGQQEAG HRAERILALI ARPDISYVSV
KTSAVVSQLS TWDTADSTER VLETVRPLYL AAKERGTFIN LDMEEYHDLD LTVAVFLRLM
EDPELLGLEM GIVLQAYLPD SGAALDVLTE AATARRTAGG ARVKVRLVKG ANLAMEKVDA
ELHGWEQAPY DTKPDVDANY VRVLDRALDP ARTDAVRIGV ASHNLFDVAL AHLMASDRGV
SEALDVEMLQ GMAPAQARAV RDAVGQVVLY TPVVAKKDFD VAVSYLVRRL EENSASQNFV
HALFAGDETS GEHAEGGTPM DHQEQAFRDS VAASETVSTT PRRAERPAPA TLVAGQPFVN
APDTDPAVES ARAWAHVVVS PETAARLAAS VPEATVLAVP ADVDSVVARA AEVAGTWRAT
TGAQRREVLL TAARLLEEAR TDLVGTMVHE ARKTVGEADP EVSEAVDFAA FYAESAAQLD
EVPGATFTPE GLTVVTPPWN FPVAIPLGSV LGPLAAGSPV IIKPSHVTPR CAAVGVDAIR
RALVEHGYEA DLVQLVSADE GEVGRRLVTH PEVSRVVLTG SIETAELFAG WRPDLHVFAE
TSGKNTLVVT AAADIDLAVK DIVRSAFGHA GQKCSAASLL VLVGAVGRSA RLHRQLVDAV
RSLAVGPATE LATTTGPLTV EPGEKLHRAL TTLDEGERWV VEPREVPGTD HLWTPGVKAG
VQPGSWFHLT EVFGPVLGIV RVDTLDEALE VQNAVSFGLT GGIHSLDEAE IAHWLENVQV
GNAYINRHIT GAIVQRQPFG GWKASVVGPG AKAGGPSYVA QFGDWSDDAS VPDRTSAPEE
WLAWAAADDA AWWEREMGVE HDPTGLDSES NVLRYRPVPT LTVRVAADAV DIEADRVLHA
ASVAGVPVTV SSAEVEDAAA FAARVAAGEV EGRIRVVGSE PGLREAAASH VGSVTVLDAP
VVASGRRELM TVVREQAVSQ TRHRYGHLER G