Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_33440 |
Symbol | |
ID | 8634977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3734644 |
End bp | 3737460 |
Gene Length | 2817 bp |
Protein Length | 938 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
Protein accession | YP_003316073 |
Protein GI | 269796618 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA ACGGTGGACG CACGGCGTCC GAGGGACGCG ACGGAGGGGG TTCGCGGCAG CTGGACGCCG CGGTCGAGGC GATCGTCAAG GCGGGGCCGC ACTCCGGCCT GCTGGTGGTC GGTCCGAGAG GCATGGGCAA GTCGACGCTG GTCGACGCCC TCGAGCAGTC GCTCGACGGG GTCGTCATCC GGGTCCGCGG CCTGCGCAAC GTTCCGACGG TCCCGTACGG TACGGCCGTC ATGGCCCAGT CCGCCATGGC GTCGGCGCTC GGGCTGCCGA CCGTGGGAGC GGCAGACGAC GTGGAGGCGG TCCGGCGCGC TCTGTCGCGC CGCGTCCCCT CAGGTGATGC CCTGGACGAA GAAGTCTTCG AGGCCACGAT GGCGAGCGCC TTCGAGCAGG CGCTGCGCCT CACGGCCGGT CAGGCGCCCG TCTACCTGCT GGTCGACGAC GTCGACCACG TCGACACGGC GAGCCGTGTG CTGTTCGCCC GCCTCGCCGC GCGCTCGAGC GCCCTTCCGG GCGGGGTGGT GTGCACGGCC ACGCGCGAGC ACGACGTACC AGAGCTGCAC GACTTCCGCC GTCTCGAGCT CAAGCCGCTG ACGGTGCCCG AGGTCGTGGA GGTGGCAGAG ACCACCCGCG CGCTCACGCC GCCCGCCTCG ATCGCCCAGC GCCTGCTGGA CCTCACCGAC GGCCGCCCGG CGGTCGTCCA AGAGCTGGTC GACCAGCTCT CGGCGGCCCA GCTCCTCGGC TCCAGCCTCG TACCGACCAC CGAGCCGCTC GGCGACGCCG CCCGAGCCGC GGTCTCCGAC CTCCTCGGTG AGCTGCCACC GCCGACGCTC GAGGCCCTGC ACCTCGTGGT CGCCTCGGGC ACCCGCTCGA CCGACCTCGT GTCACGGGTC CTCGTCAGCA TCGGGGCCTC CCTCGAGGAC CTCGTGGACG ACGGTGCGCT CGTCGGCCGC GCCGGCGTGG TCCGTCCCGC GAGCGGCCTC CTCGAACGGC ACCTGCGCGC GACCACGACG AGCAGGGTCC GACGACGCGC AGCCCAGGCC GTCCTGGACT CGTGCGTCGG GCACCTCGAC GCGACGCAGG AGGCCTTCAG CCGCGCCGTC GCGACCTCCG ACACCCCGGG GGCCTCGACC TGCCTCGTGC CGGAGCTCGT CGGGCACGCG CTCCGCGTGG TGCGCTCGAG CAGCAGCCGC GAGGCCGGCG ACCGGGCTCG CCGGCTGCTC GCCGCGGCGT GGCCGCACTG CACGCCCGAG GTCCGCGGGA TCCTGTGCGC CGCAGAGGCC CAGGTGGCGC TCCACGACGG GTACCTGGAC GATGCCCTGG CGATCGCGCG AGCCGCGATC GACGGCTTCC CCGGCGGCCC GGGGCGCGTC GCGCTGGCAC GGGTGGTGCA GAACGCGAGC CTCGTGTCGG CCGAGGCCGT GTCCGCGAGC CTCGCCCTCG ACACCCTCGA CCAGGCCGAC CCGTCGGAGC AGCACGAGGC CGAGGCCTTC ACGGTCGAGA CCTCGCTGAT GCTGCTCGCG GTCGGGCGCC CGGTCTCCGC CCAGACGCTC GTCGAGCGCC TGGGCGACCG CCGCACGACC TTCTCGGACG AGCTGCGAGC CGAGCTCGAC TACGTCCTCG CCCGCACCGG TGCCTCCGCC GACGGTGTGG GCGCGGCGGA CGCCCTGCAC CGCTGGGCCG AGGTCCGGGC TGCGGCCCCG ACCGACCGGG TGGCGCCGGG CGAGATCACC TCGTGGGGGC GCTCCCCCTG GGAGGCGGTC GGCCTGTTCC TCTACGCCCT ACGGCACGAG GGGGAGGTGC AGAGCGCCCG CGCCGTGCTG ACCGACCTCC CGGGGACGGC CCGCTCGCGC TACGAGCGCC TGCTCTTCGA CCTCAACCAC GCGATGATCG AGTTCGCCCG GGGCAACTAC CTGCTGGCCG TGCACCACGT CGAGAAGATG TCGCAGATCT CGGACCTCGG GTCCTTCGCG ACCTCGCTCC GGGTGGGCGT CCGGGTGGGC AGCGCGGTCG CGGGCGACGT GCGCGGGCCT GTCGACGCCT TCCTGCAGCC GTCGCTCCCC GGGCACACCG TCGCGGGCGG TCTCGGCCCG ACCCTGCTCG ACGTGCGTGC CGAGACGACG CGCGGGGTGT ACTTCCTCGC GGCCGGCGAG AGCGACCAGG CGCTCGAGCA CCTCGAGCAG GCGCACGCCT CGCTGTTCCT CGACGACGAC GAGCGGTCCG CCCTGCCCGA CGCGATGGCG GTGGTCGTCC TCCCGGTCGC CCTCGCCCGT GCCTACGTGG CCGAGGGCCG GACCGAGGAC GCGCGCCGCG TCGCGCCCGG GTGCGACTCG CTCATGGGTC ACGCGGCGTG GATGTCGGCG GCTGCGCAGG ACCTGGTGGA CGCGGTCCTG CGGACTCCTG CGGGCGAGGC GGTCCAGAGC ACGGAGCGGG TCACGGCGTG GTCGACCGAC GAGCGGCTCT CCCGCCCGGC GCGCGACCAC CTCCGTCAGG TGCTCTCTGC CCCGAACGGC GCGCGGCCGG AGCCGCTCCC GCGGCGGCGC CCGGGCTGGC AGACAGAGCG TCCCGAGCGG GCTGCGGTGC CGCTCGAGGT GCGGTCCGTG CTGTCCGACC GGGAGCTCGA GGTCGCGCTG CTGGTGGCCC GGGGGATGCG CAACAAGGAG ATCAGCGCGC AGGTGTTCCT CTCGGTCCGC ACGGTCGAGG CGACGCTGAC CCGGGTGTTC CGCAAGGTCG ACGTCCGCTC GCGCACCGAG CTGGTGTCGC GCCTCGGCGG CAGCACGGCT GTGCTCTCGG GGGACGTCGC ACGCTGA
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Protein sequence | MNDNGGRTAS EGRDGGGSRQ LDAAVEAIVK AGPHSGLLVV GPRGMGKSTL VDALEQSLDG VVIRVRGLRN VPTVPYGTAV MAQSAMASAL GLPTVGAADD VEAVRRALSR RVPSGDALDE EVFEATMASA FEQALRLTAG QAPVYLLVDD VDHVDTASRV LFARLAARSS ALPGGVVCTA TREHDVPELH DFRRLELKPL TVPEVVEVAE TTRALTPPAS IAQRLLDLTD GRPAVVQELV DQLSAAQLLG SSLVPTTEPL GDAARAAVSD LLGELPPPTL EALHLVVASG TRSTDLVSRV LVSIGASLED LVDDGALVGR AGVVRPASGL LERHLRATTT SRVRRRAAQA VLDSCVGHLD ATQEAFSRAV ATSDTPGAST CLVPELVGHA LRVVRSSSSR EAGDRARRLL AAAWPHCTPE VRGILCAAEA QVALHDGYLD DALAIARAAI DGFPGGPGRV ALARVVQNAS LVSAEAVSAS LALDTLDQAD PSEQHEAEAF TVETSLMLLA VGRPVSAQTL VERLGDRRTT FSDELRAELD YVLARTGASA DGVGAADALH RWAEVRAAAP TDRVAPGEIT SWGRSPWEAV GLFLYALRHE GEVQSARAVL TDLPGTARSR YERLLFDLNH AMIEFARGNY LLAVHHVEKM SQISDLGSFA TSLRVGVRVG SAVAGDVRGP VDAFLQPSLP GHTVAGGLGP TLLDVRAETT RGVYFLAAGE SDQALEHLEQ AHASLFLDDD ERSALPDAMA VVVLPVALAR AYVAEGRTED ARRVAPGCDS LMGHAAWMSA AAQDLVDAVL RTPAGEAVQS TERVTAWSTD ERLSRPARDH LRQVLSAPNG ARPEPLPRRR PGWQTERPER AAVPLEVRSV LSDRELEVAL LVARGMRNKE ISAQVFLSVR TVEATLTRVF RKVDVRSRTE LVSRLGGSTA VLSGDVAR
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