Gene Sked_33440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33440 
Symbol 
ID8634977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3734644 
End bp3737460 
Gene Length2817 bp 
Protein Length938 aa 
Translation table11 
GC content75% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003316073 
Protein GI269796618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA ACGGTGGACG CACGGCGTCC GAGGGACGCG ACGGAGGGGG TTCGCGGCAG 
CTGGACGCCG CGGTCGAGGC GATCGTCAAG GCGGGGCCGC ACTCCGGCCT GCTGGTGGTC
GGTCCGAGAG GCATGGGCAA GTCGACGCTG GTCGACGCCC TCGAGCAGTC GCTCGACGGG
GTCGTCATCC GGGTCCGCGG CCTGCGCAAC GTTCCGACGG TCCCGTACGG TACGGCCGTC
ATGGCCCAGT CCGCCATGGC GTCGGCGCTC GGGCTGCCGA CCGTGGGAGC GGCAGACGAC
GTGGAGGCGG TCCGGCGCGC TCTGTCGCGC CGCGTCCCCT CAGGTGATGC CCTGGACGAA
GAAGTCTTCG AGGCCACGAT GGCGAGCGCC TTCGAGCAGG CGCTGCGCCT CACGGCCGGT
CAGGCGCCCG TCTACCTGCT GGTCGACGAC GTCGACCACG TCGACACGGC GAGCCGTGTG
CTGTTCGCCC GCCTCGCCGC GCGCTCGAGC GCCCTTCCGG GCGGGGTGGT GTGCACGGCC
ACGCGCGAGC ACGACGTACC AGAGCTGCAC GACTTCCGCC GTCTCGAGCT CAAGCCGCTG
ACGGTGCCCG AGGTCGTGGA GGTGGCAGAG ACCACCCGCG CGCTCACGCC GCCCGCCTCG
ATCGCCCAGC GCCTGCTGGA CCTCACCGAC GGCCGCCCGG CGGTCGTCCA AGAGCTGGTC
GACCAGCTCT CGGCGGCCCA GCTCCTCGGC TCCAGCCTCG TACCGACCAC CGAGCCGCTC
GGCGACGCCG CCCGAGCCGC GGTCTCCGAC CTCCTCGGTG AGCTGCCACC GCCGACGCTC
GAGGCCCTGC ACCTCGTGGT CGCCTCGGGC ACCCGCTCGA CCGACCTCGT GTCACGGGTC
CTCGTCAGCA TCGGGGCCTC CCTCGAGGAC CTCGTGGACG ACGGTGCGCT CGTCGGCCGC
GCCGGCGTGG TCCGTCCCGC GAGCGGCCTC CTCGAACGGC ACCTGCGCGC GACCACGACG
AGCAGGGTCC GACGACGCGC AGCCCAGGCC GTCCTGGACT CGTGCGTCGG GCACCTCGAC
GCGACGCAGG AGGCCTTCAG CCGCGCCGTC GCGACCTCCG ACACCCCGGG GGCCTCGACC
TGCCTCGTGC CGGAGCTCGT CGGGCACGCG CTCCGCGTGG TGCGCTCGAG CAGCAGCCGC
GAGGCCGGCG ACCGGGCTCG CCGGCTGCTC GCCGCGGCGT GGCCGCACTG CACGCCCGAG
GTCCGCGGGA TCCTGTGCGC CGCAGAGGCC CAGGTGGCGC TCCACGACGG GTACCTGGAC
GATGCCCTGG CGATCGCGCG AGCCGCGATC GACGGCTTCC CCGGCGGCCC GGGGCGCGTC
GCGCTGGCAC GGGTGGTGCA GAACGCGAGC CTCGTGTCGG CCGAGGCCGT GTCCGCGAGC
CTCGCCCTCG ACACCCTCGA CCAGGCCGAC CCGTCGGAGC AGCACGAGGC CGAGGCCTTC
ACGGTCGAGA CCTCGCTGAT GCTGCTCGCG GTCGGGCGCC CGGTCTCCGC CCAGACGCTC
GTCGAGCGCC TGGGCGACCG CCGCACGACC TTCTCGGACG AGCTGCGAGC CGAGCTCGAC
TACGTCCTCG CCCGCACCGG TGCCTCCGCC GACGGTGTGG GCGCGGCGGA CGCCCTGCAC
CGCTGGGCCG AGGTCCGGGC TGCGGCCCCG ACCGACCGGG TGGCGCCGGG CGAGATCACC
TCGTGGGGGC GCTCCCCCTG GGAGGCGGTC GGCCTGTTCC TCTACGCCCT ACGGCACGAG
GGGGAGGTGC AGAGCGCCCG CGCCGTGCTG ACCGACCTCC CGGGGACGGC CCGCTCGCGC
TACGAGCGCC TGCTCTTCGA CCTCAACCAC GCGATGATCG AGTTCGCCCG GGGCAACTAC
CTGCTGGCCG TGCACCACGT CGAGAAGATG TCGCAGATCT CGGACCTCGG GTCCTTCGCG
ACCTCGCTCC GGGTGGGCGT CCGGGTGGGC AGCGCGGTCG CGGGCGACGT GCGCGGGCCT
GTCGACGCCT TCCTGCAGCC GTCGCTCCCC GGGCACACCG TCGCGGGCGG TCTCGGCCCG
ACCCTGCTCG ACGTGCGTGC CGAGACGACG CGCGGGGTGT ACTTCCTCGC GGCCGGCGAG
AGCGACCAGG CGCTCGAGCA CCTCGAGCAG GCGCACGCCT CGCTGTTCCT CGACGACGAC
GAGCGGTCCG CCCTGCCCGA CGCGATGGCG GTGGTCGTCC TCCCGGTCGC CCTCGCCCGT
GCCTACGTGG CCGAGGGCCG GACCGAGGAC GCGCGCCGCG TCGCGCCCGG GTGCGACTCG
CTCATGGGTC ACGCGGCGTG GATGTCGGCG GCTGCGCAGG ACCTGGTGGA CGCGGTCCTG
CGGACTCCTG CGGGCGAGGC GGTCCAGAGC ACGGAGCGGG TCACGGCGTG GTCGACCGAC
GAGCGGCTCT CCCGCCCGGC GCGCGACCAC CTCCGTCAGG TGCTCTCTGC CCCGAACGGC
GCGCGGCCGG AGCCGCTCCC GCGGCGGCGC CCGGGCTGGC AGACAGAGCG TCCCGAGCGG
GCTGCGGTGC CGCTCGAGGT GCGGTCCGTG CTGTCCGACC GGGAGCTCGA GGTCGCGCTG
CTGGTGGCCC GGGGGATGCG CAACAAGGAG ATCAGCGCGC AGGTGTTCCT CTCGGTCCGC
ACGGTCGAGG CGACGCTGAC CCGGGTGTTC CGCAAGGTCG ACGTCCGCTC GCGCACCGAG
CTGGTGTCGC GCCTCGGCGG CAGCACGGCT GTGCTCTCGG GGGACGTCGC ACGCTGA
 
Protein sequence
MNDNGGRTAS EGRDGGGSRQ LDAAVEAIVK AGPHSGLLVV GPRGMGKSTL VDALEQSLDG 
VVIRVRGLRN VPTVPYGTAV MAQSAMASAL GLPTVGAADD VEAVRRALSR RVPSGDALDE
EVFEATMASA FEQALRLTAG QAPVYLLVDD VDHVDTASRV LFARLAARSS ALPGGVVCTA
TREHDVPELH DFRRLELKPL TVPEVVEVAE TTRALTPPAS IAQRLLDLTD GRPAVVQELV
DQLSAAQLLG SSLVPTTEPL GDAARAAVSD LLGELPPPTL EALHLVVASG TRSTDLVSRV
LVSIGASLED LVDDGALVGR AGVVRPASGL LERHLRATTT SRVRRRAAQA VLDSCVGHLD
ATQEAFSRAV ATSDTPGAST CLVPELVGHA LRVVRSSSSR EAGDRARRLL AAAWPHCTPE
VRGILCAAEA QVALHDGYLD DALAIARAAI DGFPGGPGRV ALARVVQNAS LVSAEAVSAS
LALDTLDQAD PSEQHEAEAF TVETSLMLLA VGRPVSAQTL VERLGDRRTT FSDELRAELD
YVLARTGASA DGVGAADALH RWAEVRAAAP TDRVAPGEIT SWGRSPWEAV GLFLYALRHE
GEVQSARAVL TDLPGTARSR YERLLFDLNH AMIEFARGNY LLAVHHVEKM SQISDLGSFA
TSLRVGVRVG SAVAGDVRGP VDAFLQPSLP GHTVAGGLGP TLLDVRAETT RGVYFLAAGE
SDQALEHLEQ AHASLFLDDD ERSALPDAMA VVVLPVALAR AYVAEGRTED ARRVAPGCDS
LMGHAAWMSA AAQDLVDAVL RTPAGEAVQS TERVTAWSTD ERLSRPARDH LRQVLSAPNG
ARPEPLPRRR PGWQTERPER AAVPLEVRSV LSDRELEVAL LVARGMRNKE ISAQVFLSVR
TVEATLTRVF RKVDVRSRTE LVSRLGGSTA VLSGDVAR