| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33360 |
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| Symbol | |
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| ID | 8634969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 3716594 |
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| End bp | 3717784 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | |
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| Product | Flp pilus assembly protein, ATPase CpaF |
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| Protein accession | YP_003316065 |
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| Protein GI | 269796610 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.111015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCG CCGGCGGCGA GCTGCTGCAC GGGGTCCGCG ACCGGCTCGC CGGCAGCGGG
CCGCACCCCA CCCGCGCCCA GGTGGTCGAC GCCCTCGAGG CGGGGGACGT CCTGCTCGGC
AGCACCGCCC TCGACGAGCT CCTCGGTGTG GTCCGGGCCG AGCTGTTCGG TGCCGGGCCG
CTCCAGGCGC TGCTCGACGA CCCTGCGGTC ACCGACGTGC TCGTCAACGG CCCCACCGAG
GTCTGGGTCG ACCGCGGCGC CGGGCTGGAC CGGGCACCGG TCGACCTCGG CACGGACGAC
GACGTCCGCG AGCTCGCCGT GCGGCTCGCG GCCGCAGGTG GTCAGCGCCT CGACGACGCG
AGCCCGACGG TCGACGCGCG GCTGCCGGAC GGCACCCGGC TGCACGCCGT CCTCGCGCCC
CTGTGCCCCG CGGGGGCCGT CGTCTCGTTG CGGACGCTGC GCTCCCAGGC CTTCACCCTC
GACGAGCTCG CCGCGGCGGG GACGGTCCCA CCGGGGTGGG TCGCGGTCCT CGAGGCCCTG
GTGGCGGGAC GTGCGTCCTA CCTGGTCTCG GGTGCGACCG GGACGGGGAA GACCACGCTG
CTGGCCTCCC TGCTGTCGCT CGTCCCACCC ACGGAGCGCA TCGTCACCAT CGAGGAGGCC
AGGGAGCTCG TCCCGACGCA CCCGCACGTC GTGCCCCTCA CTGCCCGCCA CGCCAACGTC
GAGGGCACCG GTGGGGTCGG TCTCGCCGAC CTCGTGCGGA CCGCGCTACG CATGCGCCCG
GACCGCATCG TCCTCGGGGA GTGCCGCGGC GCGGAGGTGC GAGACGTCCT CACGGCGCTC
AACACCGGCC ACGCCGGGGG CAGCGCGACC ATCCACGCCA ACACCGCCCG GGACGTCCCT
GCCCGTCTCG AGGCCCTCGC CGCGCTCGCC GGGATGTCGT CGTCCGACCT CGTCGCGCAG
GCCGTGAGCG CCTTCGACGC CGTGCTGCAC CTGCGCCGGG GCCGTCCAGG CCCGTCGGTG
ACCGCCGCGG GGGAGACGGC CCGGGCACGT CGCTACCTGG AGGAGGTCGC CGTCGTGACC
CGCGACCAGG GCGGACGCCT CGAGGTTAGG CCCGCGCTCA CCTGGGACGG CGACGGCACC
CCCTACCGGC ACGCCGGGTG GGAGCACCTC GCCCGCAGGC TCGGGCTGTG A
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| Protein sequence | MSPAGGELLH GVRDRLAGSG PHPTRAQVVD ALEAGDVLLG STALDELLGV VRAELFGAGP
LQALLDDPAV TDVLVNGPTE VWVDRGAGLD RAPVDLGTDD DVRELAVRLA AAGGQRLDDA
SPTVDARLPD GTRLHAVLAP LCPAGAVVSL RTLRSQAFTL DELAAAGTVP PGWVAVLEAL
VAGRASYLVS GATGTGKTTL LASLLSLVPP TERIVTIEEA RELVPTHPHV VPLTARHANV
EGTGGVGLAD LVRTALRMRP DRIVLGECRG AEVRDVLTAL NTGHAGGSAT IHANTARDVP
ARLEALAALA GMSSSDLVAQ AVSAFDAVLH LRRGRPGPSV TAAGETARAR RYLEEVAVVT
RDQGGRLEVR PALTWDGDGT PYRHAGWEHL ARRLGL
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