| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33220 |
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| Symbol | |
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| ID | 8634955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 3701369 |
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| End bp | 3704044 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | helicase family protein with metal-binding cysteine cluster |
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| Protein accession | YP_003316051 |
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| Protein GI | 269796596 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.442514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCGTG TCGACGAACT CCTCGACGTC CTCCTCGCCG GAGGACGACG CTCTGGACAG
CTGACGCACG TCGAGCACAT CCCGGCGCGC GAGGGCACAC AGGCCGACTG GCCGGCCTGG
GCCGACCCGT CGCTCGTGTC CGGGTACAAG GCCCTCGGCG TCGACCGCCC GTGGGTGCAC
CAGGTCGAGG CGGCCGAGGC CGCGTGGGCC GGGAAGCACA CCGTCGTCGC GACGTCGACG
GGGTCCGGCA AGTCACTGGC CTTCTGGCTG CCCGCGCTGA CCTCCGTGCG CGGCGACCGT
GCCGGGGCGG CCTTCGACCC CGGGCGCATC GAGTCCGCGC GCGACCGCGG GTCCGTGCTG
TACCTCAGCC CGACCAAGGC GCTCGCCGCC GACCAGCTCG CGTCGGTCAC CCGGCTGCTC
TCGGCCTCGA AGGCTCGCGA CGTCCAGGTG GACACCTGCG ACGGTGACAC CCCGTTCTCC
GCGCGGAAGT GGATCCAGGA CCACGCCGAC GTGGTCCTCA CCAACCCGGA CTACCTGCAC
TTCTCGATGC TGCCGAACCA TGCCCGGTGG GCACGCTTCC TGCGGTCGCT GCGGTATGTC
GTCGTCGACG AGGGGCACGC GTTCCGCGGG GTGTTCGGCG CGCACGTCTC CCTGGTCCTG
CGGCGCCTCC AGCGCCTCGC CGCCTACTAC GCGCCGAGCT CGGCGACGCG CGGCAGCGGG
CGCACCCGCA CCGCGGTGCA GCACCGCAGC GCGAGCGGGC TGCTGCTGCC GCGCGTCGGG
CCGACCTTCG TCGTGGCCTC CGCGACGACC GCCGACCCCG CGGTGAGCGC CGGTCGGCTG
GTGGGCGTGG ACCCGTCCGA GGTCGTCGCG GTCACCGAGG ACGCCTCCCC GGCGGGACGC
AAGACCTTCG CCCTGTGGGA GCCGCCCGAG CTCCCGCGGT ACGACGCCGC AGCGTTCACG
CGCTCGCGTG CCGAGCGTGC CGACGGTGAC GCGGCGGTCG CGGCGCTGGT CGACGACCCG
TGGGACGTCG GCGGCGCTCC GGGGGACCTC GGTCTCGTCG ACGACCTGGG TCTGGTCGAC
GACGCGGACG CCGTCGACGC CGAGGGCGAC CAGGACCGGC CGCGCCGCTC GGCGACGGCC
GTCGCCGCGG ACCTGCTCGC CGACCTCACC GTCCACGGCG CGCGCACCCT GGCCTTCACG
CGCTCCCGCC GTGGCGCCGA GTCCGTCGCC ACGACCACCC AGGAGCACCT GCGCCCGGTG
GACCCGTCGC TGCCCGGGAC GGTCGCCGCC TACCGCGGCG GGTACCTGCC CGAGGAGCGC
CGCGCGCTCG AGGCAGCGGT GCGCTCCGGT GAGATCCGTG CGCTCGCGAC CACCAACGCC
CTCGAGCTCG GGGTCGACAT CTCCGGGCTC GACGCGGTGC TCATCATCGG CTGGCCGGGA
ACCCGGGTCT CCCTGTGGCA GCAGGCCGGG CGCGCCGGCC GTGCCGGGGC TGACGGGCTC
GTCGCCTTCG TCGCGCGCGA GGACCCGCTC GACACCTTCC TCGTGCACCA CCCCGACGCG
ATCTTCCGGA CACCCATCGA GGCCACGGTC TTCGACCCGA CCAACCCCTA CGTGCTCGCC
GGGCACCTCT GCGCAGCAGC CGGTGAGCTG CCCGTGCGCA CCGAGGACCT CCCGCTCTTC
GGGGGCGACG CCGCCCGTAC CCTGCTCGAC CAGCTCACCG AGCGCGGGAC GCTGCGGCGC
CGCAGCTCGG GCTGGTTCTG GACGCACCAC CAGAACGCCG CCGGGTTCAC CAACATCCGC
GGCGAGGGCG GCACGCCCGT GTCCGTGGTC GAGTCGGCGA CCGGACGGCT GCTCGGCACG
GTGGACGCCG CCGCGGCGGA CGGCTCGGTC CACACCGGCG CGGTGTACGT GCACCAGGGC
GAGACCTTCG TGGTCGAGGA CTACAACCTG GTCGACTCGG TAGCCCTCGT GGGCCGTGAG
GACGTCGGGT ACGGGACGTG GTCGCGGTCG ATCACGTCGA TCGACGTCAT CGAGGAGACC
GACCACGTCG ACTGGGGCTC GGAGACCTCG GCAGACGGCC GACCCGCCGT CGAGTGGGGC
TTCGGGACCG TCGAGGTGCA CCACCAGGTG GAGAGCTTCC AGCGCCGGCG GGTCCCCTCG
CAGGAGGTCC TCGGCACCGA GCCCCTCGAC CTGCCCGTGC GGACCCTGCG CACGGCCGCC
GCCTGGTGGA CCGTCTCGGC CGAGCTGCTC GAGGCCGCGC AGGTCGACGC GGACCAGGCG
CCGGGCGCGC TGCACGCCGC CGAGCACGCG TCCATCGGCC TGCTCCCCCT GCTCGCCACC
TGCGACCGGT GGGACCTCGG CGGCGTCTCG ACCGCGATGC ACGTCGACAC CGAGCGGGCC
ACCGTGTTCG TCTACGACGC GTTCCCCGGC GGTGCCGGCT TCGCCGAGCG CGGGTACCAC
CTCGCCCAGA CGTGGCTCGC CGCGACCCGC GAGGCCATCG CCACCTGCTC GTGCGCCACC
GGGTGCCCGG GCTGCGTGCA GTCCCCTAAG TGCGGCAACG GCAACAACCC GCTCGACAAG
GCCGCCGCGG TCAGGCTGCT CGACGCGGTG CTGGCGCAAG GGCCGGGGAG TGCTGTGGGC
GGCGGAGCGG GCCTGGGAGT GCCCGACAAG GAGTGA
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| Protein sequence | MARVDELLDV LLAGGRRSGQ LTHVEHIPAR EGTQADWPAW ADPSLVSGYK ALGVDRPWVH
QVEAAEAAWA GKHTVVATST GSGKSLAFWL PALTSVRGDR AGAAFDPGRI ESARDRGSVL
YLSPTKALAA DQLASVTRLL SASKARDVQV DTCDGDTPFS ARKWIQDHAD VVLTNPDYLH
FSMLPNHARW ARFLRSLRYV VVDEGHAFRG VFGAHVSLVL RRLQRLAAYY APSSATRGSG
RTRTAVQHRS ASGLLLPRVG PTFVVASATT ADPAVSAGRL VGVDPSEVVA VTEDASPAGR
KTFALWEPPE LPRYDAAAFT RSRAERADGD AAVAALVDDP WDVGGAPGDL GLVDDLGLVD
DADAVDAEGD QDRPRRSATA VAADLLADLT VHGARTLAFT RSRRGAESVA TTTQEHLRPV
DPSLPGTVAA YRGGYLPEER RALEAAVRSG EIRALATTNA LELGVDISGL DAVLIIGWPG
TRVSLWQQAG RAGRAGADGL VAFVAREDPL DTFLVHHPDA IFRTPIEATV FDPTNPYVLA
GHLCAAAGEL PVRTEDLPLF GGDAARTLLD QLTERGTLRR RSSGWFWTHH QNAAGFTNIR
GEGGTPVSVV ESATGRLLGT VDAAAADGSV HTGAVYVHQG ETFVVEDYNL VDSVALVGRE
DVGYGTWSRS ITSIDVIEET DHVDWGSETS ADGRPAVEWG FGTVEVHHQV ESFQRRRVPS
QEVLGTEPLD LPVRTLRTAA AWWTVSAELL EAAQVDADQA PGALHAAEHA SIGLLPLLAT
CDRWDLGGVS TAMHVDTERA TVFVYDAFPG GAGFAERGYH LAQTWLAATR EAIATCSCAT
GCPGCVQSPK CGNGNNPLDK AAAVRLLDAV LAQGPGSAVG GGAGLGVPDK E
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