Gene Sked_33070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33070 
Symbol 
ID8634940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3681003 
End bp3681863 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003316036 
Protein GI269796581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.468184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.320706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CCCCGGACGG GCACGTCATC AGCGTCCGCG ACCTGACGAT GGCCTACGGC 
AGCACCCGCG TGCTCGAGGG CATCGACCTC GACGTCGAGG CGGGCGGGGT CACCGCCCTG
CTCGGCCCCA ACGGCGCCGG CAAGACCACC ACGATCGAGA TCCTCGAGGG CTTCCGCGGT
CGGTCCGGCG GCGAGGTCCG CGTGCTCGGC GAGGACCCCG CCAAGGCCTC CCGGGCGTGG
CGGTCGCGCG TCGGGATCGT CATGCAGTCC TGGCAGGACC ACGCCCGGTG GCGCGTCGTC
GAGCTGGTCC GGTACGCCGC GGCCCACTAC GACCACCCCG TGCGCGCCGA GGAGGCCCTC
GAGATGATGG GCCTGGGCGA CAAGGCCCAG GCCACCATCA ACCAGCTCTC GGGAGGCCAG
CGCCGCCGGC TCGACGTCGC CCTCGGCATC GTGGGGCGCC CGGAGCTGCT GTTCCTCGAC
GAGCCCACGG CCGGCTTCGA CCCCGCAGCC CGCCGATCCT TCCACGAGGT CCTCGGGACG
CTCGTGGACT CCGGGCTCAC CGTGCTCCTC ACCACCCACG ACCTCGCCGA GGCAGAGCGT
CTCTCGCGCC GCATCGTCCT CCTGGTCCGC GGGCACCTCG TCGCCGACGG CTCCGCGGCC
GACCTGGCGC GGGCGGTCGA CGCACCCACG ACGGTCCGGT GGCGCGAGGA CGGCGAGGTC
CGCACGGAGC AGACCGTGGA GCCCGACGCG CTCGTCCACC GGCTGTACGC CACGCACGGC
TCGGCGCTGT CCGGCGTCGA GGTCAGACCA CCCGACCTCG AGGACGCGTA CCTCGAGATC
GTCGCGAGGG AGGAAGCATG A
 
Protein sequence
MSATPDGHVI SVRDLTMAYG STRVLEGIDL DVEAGGVTAL LGPNGAGKTT TIEILEGFRG 
RSGGEVRVLG EDPAKASRAW RSRVGIVMQS WQDHARWRVV ELVRYAAAHY DHPVRAEEAL
EMMGLGDKAQ ATINQLSGGQ RRRLDVALGI VGRPELLFLD EPTAGFDPAA RRSFHEVLGT
LVDSGLTVLL TTHDLAEAER LSRRIVLLVR GHLVADGSAA DLARAVDAPT TVRWREDGEV
RTEQTVEPDA LVHRLYATHG SALSGVEVRP PDLEDAYLEI VAREEA