Gene Sked_32910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32910 
Symbol 
ID8634924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3666676 
End bp3667878 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content76% 
IMG OID 
Producttranscriptional regulator/sugar kinase 
Protein accessionYP_003316020 
Protein GI269796565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.235985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.423272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAC CCCTCCAGCC GACAGTCTCG GCGCCGACCG CCTCGACAGC GTGGACCCCG 
CTGTCCGGCC CGACGCGCCA GATCGCCCTC GAGGTGCTCC TCGACGGCCC GCTGTCGCGC
AGCGCGCTGT CGCAGCGGCT GGGCCTGTCC CCTGGCAGCC TCACCCGGCT GACCAAGCCG
CTGCTCGACG CCGGCCTCCT CGTCGAGGCC CAGGCGCCCG CCGAGGCCGA CGACGCGCCG
CGCCTCGGTC GGCCCGCGCA GCCCCTCGAC GTGGACCCGT CGTCGCACCA CTTCGTGGGT
GTGAAGCTCA CCGGCGACCA CGCCTACGCC GCGCTCACCG ACCTGCGCGC CGGGGTCCTC
GCCGCGGCCG ACGCCCCGCT CGACGCGACC GACCCCGAGC GCGTGGTCGA CGTGGTGGCC
CAGCTCGTCG ACGACCTCGT CGCGACCCTC GCGACGGTGC GGCCGTCCGC GTCGGTGACC
GGCCTCGGCG TGAGCCTCGG CGGGCACGTC GAGCGCCGCA CCGACGTGAC GCTCGCGGAC
CATCTCGGCT GGCGCGACCT CCCCCTCGCC GCCCTGCTGG CCGAGCGCAC CAGCCTGCGC
ACCGTCGTCG AGAACGACAT CGTCGCGGTC ACCGAGGCCA CCCACTGGTT CGGCGAGGGC
CACGGCTGCT CACGCTTCGC CCTCGTGACC ATCGGCGCGG GCATCGGCTA TGGGCTCGTG
GTGCACGACG CGGCCGTCGA GAGCCCGGAG GCCGGGCTCA GCCTCCTCTC GCACTTCTCC
CTCGACCCCG ACGGACCGGT CGGCCCGTGC GGTCACGCCG GCTGCGCGAC GGCGATGCTC
ACGACGGGCG CGCTCGTCGA GCGGGCGTCG GCGCTGCTGG GGCGCGAGGT CACCTACGAC
CAGCTGCTCG ACCTCGCCGC CGCCGGTGAC CCCGTCGCGC GCGACCTGGT CGACGCGAGC
GGCCGCGCGC TGGGCCGGCT GCTCGCCGCG GTCGCCAACC TCACGATGCC CGAGCGTGTC
GTGCTGGGCG GCGAGGGCGT GCGTCTCGCC GAGGTGGCCG CCGACGCCCT GCAGACCGGC
CTGCGCGGCG ACCGCGACCC CCGGACCCGG CCGCTCGACA TCCGCCTGCA GAGCCCCGAG
CTCGCCCACT GGGCTCGCGG CGCCGCTGTG GTCGCCATCC AGACCTTCGT CCTCGGGCGC
TGA
 
Protein sequence
MTSPLQPTVS APTASTAWTP LSGPTRQIAL EVLLDGPLSR SALSQRLGLS PGSLTRLTKP 
LLDAGLLVEA QAPAEADDAP RLGRPAQPLD VDPSSHHFVG VKLTGDHAYA ALTDLRAGVL
AAADAPLDAT DPERVVDVVA QLVDDLVATL ATVRPSASVT GLGVSLGGHV ERRTDVTLAD
HLGWRDLPLA ALLAERTSLR TVVENDIVAV TEATHWFGEG HGCSRFALVT IGAGIGYGLV
VHDAAVESPE AGLSLLSHFS LDPDGPVGPC GHAGCATAML TTGALVERAS ALLGREVTYD
QLLDLAAAGD PVARDLVDAS GRALGRLLAA VANLTMPERV VLGGEGVRLA EVAADALQTG
LRGDRDPRTR PLDIRLQSPE LAHWARGAAV VAIQTFVLGR