| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_32680 |
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| Symbol | |
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| ID | 8634901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 3636631 |
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| End bp | 3639519 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003315997 |
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| Protein GI | 269796542 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTG GTCGCAAGCT CGTCATCGTG GAGTCGCCCG CCAAGGCACG CACGATCGCC
GGTTACCTCG GCGACGACTA CGAGGTCGAG GCGAGCGTCG GGCACATCCG TGACCTCCCG
CAGCCCTCGG AGATGCCTGC GGACATGAAG AAGGGCCCCT TCGGCAAGTT CGCGGTCAAC
GTCGACGGTG GGTTCGAGCC GTACTACGAG GTGTACGCGG ACAAGAAGAA GAAGGTCGCC
GAGCTCAAGC GGGCCCTGAA GAACGCCGAC GAGCTCTACC TCGCGACCGA TGAGGACCGC
GAGGGCGAGG CCATCGCGTG GCACCTGCTC CAGGAGCTCA AGCCCAAGGT CCCCGTGCAC
CGCATGGTGT TCCACGAGAT CACCCGCGAG GCGATCAACC GGGCTCTGGA GAACACCCGC
GAGATCGACG GTCGCATGGT CGACGCGCAG GAGACCCGCC GCATCCTCGA CCGCCTCTAC
GGCTACGAGG TGTCCCCGGT GCTGTGGCGC AAGGTCCGCC AGGGCCTGTC TGCTGGTCGT
GTGCAGTCGG TCGCGACCCG CCTGGTCGTC GAGCGCGAGC GCGAGCGCAT GGCCTTCGTC
ACCGCGAACT ACTGGGACGT GTCGGGCGAC TTCACCACGC AGGACGGCCC GGACGCCGGC
GAGTGGTTCT CCGCGAAGCT GGTCCAGGTG GACGGCGCAC GCGTGGCCTC CGGCCGCGAC
TTCACGGACG CCGGCGAGCT GAAGAGCCCC CAGGGAGTGG TGCATCTCGA CGAGCAGGCC
GCGCACGCCC TCGTCACCGC CCTGGCCGAC CAGCCGGCCG CGGTCCGCAG CCTCGAGACG
AAGCCGTACA CGCGTCGCCC GGCCGCACCG TTCACCACCT CGACGCTCCA GCAGGAGGCG
TCGCGCAAGC TCCGCATGTC CTCTCGGCAG GCGATGCGCA CCGCGCAGAC CCTGTACGAG
AACGGGTACA TCACCTACAT GCGTACGGAC TCCCCGTCGC TGTCGACCCA GGCCACCGAC
GCCGCGCGCC GCCAGGCCGC CGAGCTCTAC GGCCCCGAGT ACGTGCCGTC GTCGCCCCGC
GTCTACGCCT CGAAGGCCAA GGGTGCGCAG GAGGCCCACG AGGCCATCCG CCCCGCAGGG
GACTCGTTCC GCACGCCGGC CCAGGTGTCC CGCGAGATCA GCGGCGACCA GTTCAAGCTC
TACGAGCTCA TCTGGAAGCG CACGGTCGCG TCGCAGATGG GCGACGCCCG CGGCTCGACG
GCCTCGGTCC GTCTCGGTGT CGCCGGGACC CTCCCCGCGG GCGCACCGTC GATCGGCGAC
GCCGGCCCTG GCTCCCAGAC CGACGCCGTC TTCGCGGCCT CGGGCACGGT CATCACCTTC
CGCGGCTTCC TCGCCGCCTA CGAGGAGGGT CGCGACACCG ACCGCTACGA CTCCGCCGAC
TCCACGGGGA CCTCCAAGAA GGCCGAGGGC GACGCACGGC TGCCCCAGAT GGCCGAGGGC
GACGCGATGA CCTCGCGCGA GCTCTCCGCA GACGGGCACT CGACCTCGGC GCCGCCGCGC
TTCACGGAGG CCAGCCTCGT CAAGGCGCTC GAGGAGCGCG GCATCGGCCG CCCCTCGACG
TACGCGTCGA CGATCTCGAC CATCCAGGAC CGCGGCTACG TGCTGAGCCG CGGCCAGGCC
CTCGTGCCCA GCTGGCTGGC CTTCGCGGTG ATCCGGCTGC TCGAGGAGCA CTTCGGCCAG
CTCATCGACT ACGACTTCAC CGCCGAGATG GAGGCGGACC TCGACGCGAT CGCCGCGGGC
GACAAGGAGC GCGTCGCCTG GTTGACGCAG TTCTACTTCG GCGACGACAC CGAGGGCTCT
GACGAGGGGC TGCGCCAGCT CGTCGAGGAC CTCGGCGACA TCGACGCCCG CGAGATCAAC
TCGGTGCCGA TCGGCGAGGG CATCACGCTG CGCGTCGGTC GCTACGGCCC GTACATCGAG
GACACCGCCG CCGAGGTCGC GGAGGGCGAG AACCCGCCCC GTGCCTCCGT GCCCGACGAG
GTCGCGCCCG ACGAGCTCAC GGTCGCCAAG GCGCGCGAGC TCCTCGAGAC CCAGGGCGAC
GGCGACATCG AGCTCGGGGT GGACCCGTCG ACCCAGACGA CCATCGTCGC CAAGGCGGGC
CGCTACGGCC CGTACGTGAC CGAGCTCCTG CCCGAGCCCG AGTTCGAGGA GGGCCTGTCG
GCCGCCGCGC TCAAGCGCGC CAAGGCCGCC CTGCCCAAGC CGCGCACGGC GTCGCTGCTC
AAGACGCAGT CGCTCCAGAC GATCACCCTC GACGACGCGC TCCAGCTGCT CTCGCTGCCG
CGCGTGGTCG GCGTCGACCC CGAGTCCGGG ACCGAGATCA CCGCGCAGAA CGGCCGCTAC
GGCCCGTACC TCAAGCGCGG CACGGACTCC AGGACGCTGC CGAGCGAGGA GTCGATGTTC
ACGGTCACCC TCGCCGAGGC CCTCGAGATC TACGCGCAGC CCAAGCGTGG GCGCGGGGCC
ACCGCCGCGC CGCCGCTCAA GGAGCTCGGC GAGGACCCCA CGTCGCAGAA GCCGATCGTC
ATCAAGGACG GTCGCTTCGG CGCCTACGTG ACCGACGGGA CGACCAACCG GACGCTCCCC
AAGGACATCA CCATCGAGGC GATCACCCAC GAGCAGGCCG TCGAGCTGCT CGCGGAGAAG
CGCGCCAAGG GCCCGGTCAA GAAGACCACC CGTGCGACCG CCGCCAAGAA GACCCCGGCC
AAGAAGACGC CCGCCAAGGC CACGGCAGCG AAGTCGACGA CGGCCAGGTC GACGACCACG
AAGACGGCGA CCGCCAAGAA GGCCCCGGCC AAGAAGGCCC CCGCGAAGAA GGCAGCGCCC
GAGGCCTGA
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| Protein sequence | MSAGRKLVIV ESPAKARTIA GYLGDDYEVE ASVGHIRDLP QPSEMPADMK KGPFGKFAVN
VDGGFEPYYE VYADKKKKVA ELKRALKNAD ELYLATDEDR EGEAIAWHLL QELKPKVPVH
RMVFHEITRE AINRALENTR EIDGRMVDAQ ETRRILDRLY GYEVSPVLWR KVRQGLSAGR
VQSVATRLVV ERERERMAFV TANYWDVSGD FTTQDGPDAG EWFSAKLVQV DGARVASGRD
FTDAGELKSP QGVVHLDEQA AHALVTALAD QPAAVRSLET KPYTRRPAAP FTTSTLQQEA
SRKLRMSSRQ AMRTAQTLYE NGYITYMRTD SPSLSTQATD AARRQAAELY GPEYVPSSPR
VYASKAKGAQ EAHEAIRPAG DSFRTPAQVS REISGDQFKL YELIWKRTVA SQMGDARGST
ASVRLGVAGT LPAGAPSIGD AGPGSQTDAV FAASGTVITF RGFLAAYEEG RDTDRYDSAD
STGTSKKAEG DARLPQMAEG DAMTSRELSA DGHSTSAPPR FTEASLVKAL EERGIGRPST
YASTISTIQD RGYVLSRGQA LVPSWLAFAV IRLLEEHFGQ LIDYDFTAEM EADLDAIAAG
DKERVAWLTQ FYFGDDTEGS DEGLRQLVED LGDIDAREIN SVPIGEGITL RVGRYGPYIE
DTAAEVAEGE NPPRASVPDE VAPDELTVAK ARELLETQGD GDIELGVDPS TQTTIVAKAG
RYGPYVTELL PEPEFEEGLS AAALKRAKAA LPKPRTASLL KTQSLQTITL DDALQLLSLP
RVVGVDPESG TEITAQNGRY GPYLKRGTDS RTLPSEESMF TVTLAEALEI YAQPKRGRGA
TAAPPLKELG EDPTSQKPIV IKDGRFGAYV TDGTTNRTLP KDITIEAITH EQAVELLAEK
RAKGPVKKTT RATAAKKTPA KKTPAKATAA KSTTARSTTT KTATAKKAPA KKAPAKKAAP
EA
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