Gene Sked_32280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32280 
Symbol 
ID8634861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3594403 
End bp3595428 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315958 
Protein GI269796503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.355174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CACCGCGACG GGCTGTCCCG CCCGCCGTCG TCAAGGCCGC CGTCCGGCTG 
CTCGTCTGGG CTGCGGTCGT GGCGCTCGCC TGGTACCTCG TGCGGGCGCT GCGCCGGGTC
GACTGGCCTG CCGTCGGTGA CGCGATCTCC CACCTGGCCT GGTGGCAGGT GGCCGTGCTG
CTCCTGCTGG TGGTCGCACG AGCCTCGCTG TCGTCGACCC CGCTCGCGCT GTTCACCGAG
GGGCTGGGTC TGCGCCGCGC GATCGGCAAC GACCTCGTCG GGAACCTCGC CGCGACCGTC
ACCCCCGCGC CAGCCGACAT CGTCGCGCGC GCTGCGATGT TCCGTGCCTG GGGCGTCGAC
GTCGGGCAGG GCATGGCGGG TCTCGTGCTC AACTCGATCC TCTACTACGT GGTGCGCCTC
GCGGCCCCGG TCGCCGGAGC GGTCCTCATG CTCTGGACGG TCGGTGAGGA GGGCGCCGTC
GGCTGGGCTG CGGTGCTCAG CGGGCTCGCG AGCGCCGCGA TCGTCGCGGT GCTCGTCGTC
GGCTCGCGGA GCGCGACCTC CGCCGGTGCC GTGGGCCGGG TGCTCGGCCG CGTCGCGCAC
CGCGTCCGGC GCACGCTCCC CGGCCCGGAG CAGATGGAGA AGACCGTCGT CGAGTTCCAC
GCCCGCGTCG CCGCGCGGTG GCTGCGCCAC TGGCCGGCTG CCCTGCTGAG CCTGACCGGG
ATGGTCGTGG TCGAGTCCAC GATCCTCGTC CTCGCCCTGC GGTTCGTCGG GGTCCCGCCC
TCGCAGGCGC CGACCCTCGT GGTGGTCGCG TGCTTCCTCA GCGTCTACCT GCTGATGGCG
ACGCCGTTCC TCGGCCTCGG GGTGCTCGAC GCCGCGGTGG TCGCCCTGGT CAGCATGCAC
ACCCCGGCGC AGGCCTCCGA CCTGGTGGCC GGCCTGGTGG TGTGGCGGGT CGCCGTCCAG
CTCGTGCCGC TGGCCGCGGG CGTCGTGCCG CTCCTGTCGG TCCGCAGGTC ACGCCCGACG
GCCTGA
 
Protein sequence
MTSTPRRAVP PAVVKAAVRL LVWAAVVALA WYLVRALRRV DWPAVGDAIS HLAWWQVAVL 
LLLVVARASL SSTPLALFTE GLGLRRAIGN DLVGNLAATV TPAPADIVAR AAMFRAWGVD
VGQGMAGLVL NSILYYVVRL AAPVAGAVLM LWTVGEEGAV GWAAVLSGLA SAAIVAVLVV
GSRSATSAGA VGRVLGRVAH RVRRTLPGPE QMEKTVVEFH ARVAARWLRH WPAALLSLTG
MVVVESTILV LALRFVGVPP SQAPTLVVVA CFLSVYLLMA TPFLGLGVLD AAVVALVSMH
TPAQASDLVA GLVVWRVAVQ LVPLAAGVVP LLSVRRSRPT A