Gene Sked_32220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32220 
Symbol 
ID8634855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3586735 
End bp3588111 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315952 
Protein GI269796497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.695383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGT TCGAGCTCGA GGGCGGGCAG CGCGCCGAGC CCGTGGCGAC GATGCGCCCT 
GACGACGCGT CCTTCGGCGA CGTGCTCTCC GTCGTGCTCG ACCACCTCCC GACGCTCCTC
GGGGAGCGGC TCTTCATGAC GCTCCCGGGG ACCTCGGTCC CCGACGCGCT CTCCCGGGGT
GAGGCGACGG TCTTCGCGAT CGACGCGGCG GGCGACCCCG TGGTGGTCCA GGCGGTCCCG
CTGCTCGCGG GGGCCCAGCT GCTCGTCGCC CTGAGCGGCG CCGGACGGGC GTCCGGGACC
ACGCGGGGCA CCCTCGCCGC CGCCTACGGG CCGGGCCCGG ACCACTTCCA CCACGACCTC
GCGGCGTTCT TCGACCGTGA CGGCGTGCCG CGTGCGACGG GCACCGGGCG CAGCGCGCGG
CTGGTCCTGG TGTGCGCGGA GATCGCCGAC GACGCGGTCG ACGCGGTCTC CTTCGTGTCG
GCCGACGCCG CGCGCGTGCA GGTCCTCACG GTCGGGACCG TCGAGGGACC GTCCGGGCGG
GCGCTGCTCG ACGTGTCGGT GCTCCGCCCC GGCGAGGTCG CCGCTCGCCG CACGGTGTCG
ATCGACCTGG ACGGGGCCAC GACCGGCCGT CCGGCGCCGC GGGCTGCCGT GCGGCCGGCC
GCTGCCTCCA CCTCCGGGTC CCTGCCGGCC TTCGGGCGGG CAGACCCGCC GGGGACGGTG
CGACGACCGC CTCCTCGCCC GCAGCCTGCC CCGGCGCCGC CGACCTCGCG TCCCGCCGTC
ACAGCCGCCG TCGCTCCAGG CGTCGTCGAC GACGTCTACG TCCCGGTGTT CCTCGACCTC
CCCGAGGCGC TCGGCGCGCT CCCAGAACGT CCCGGTGACC TCCCGCAGCT CCCCGACCTC
GGCACGGTGC GGGTGCCCCG CGGGGTGGAC CTCTCGCTCC CCGCCCCTGC GCTGGCGCCG
ATCCCGTCAC GCGCCGGTGG TTCCACCCTC GTCGCGGACC CCCAGGCCCC GGTCGTGGCA
CCGACGGTCC GCGCCGCTCC CGCTCCCACC CCCGCGCCCA GCACCGTTCC GTCCGCCAGC
ACCGTCCCGT CCGCAACCTC CGCCTCGTCT CCCGGCCCCG CGCACGTGCG TCTCGGCCTC
CTCGCGCAGA CGCTCACCGC TCCCGTCGAC CTCGTCTGGG TGCGGCACCG ACGGGGTGAG
CGCTTCGCGG TGGTGCTCGG CCTCGACGGC CTGCTGAGCG CACCGGACGG CGTGCGCTTC
ACCGACCCGG ACGACGCGGC ACGGACGCTC TCGGGTGCCG AGAGCTGCAA CGGCTGGCGG
ATGTGGCGCG CCGGAGAGCA CGGCCCCAGC CTCGACGAGC TCGCCCCGCA GGCCTGA
 
Protein sequence
MPLFELEGGQ RAEPVATMRP DDASFGDVLS VVLDHLPTLL GERLFMTLPG TSVPDALSRG 
EATVFAIDAA GDPVVVQAVP LLAGAQLLVA LSGAGRASGT TRGTLAAAYG PGPDHFHHDL
AAFFDRDGVP RATGTGRSAR LVLVCAEIAD DAVDAVSFVS ADAARVQVLT VGTVEGPSGR
ALLDVSVLRP GEVAARRTVS IDLDGATTGR PAPRAAVRPA AASTSGSLPA FGRADPPGTV
RRPPPRPQPA PAPPTSRPAV TAAVAPGVVD DVYVPVFLDL PEALGALPER PGDLPQLPDL
GTVRVPRGVD LSLPAPALAP IPSRAGGSTL VADPQAPVVA PTVRAAPAPT PAPSTVPSAS
TVPSATSASS PGPAHVRLGL LAQTLTAPVD LVWVRHRRGE RFAVVLGLDG LLSAPDGVRF
TDPDDAARTL SGAESCNGWR MWRAGEHGPS LDELAPQA