Gene Sked_32200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32200 
Symbol 
ID8634853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3584580 
End bp3585539 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content75% 
IMG OID 
ProductZn-dependent oxidoreductase, NADPH:quinone reductase 
Protein accessionYP_003315950 
Protein GI269796495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.497144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCAG CCACGGTCGC CCGGTTCTCG CCCGACTCCC CCGTCGACGC GCTCGAGGTC 
GGTGAACGCC CCGAGCCGGC CGAGCGCGAG GCGTGGACCA CCGTCGACGT GCGTGCGGCG
AGCCTCAACC ACCACGACCT GTGGTCGCTG CGCGGCGTGG GCCTGCGCGA GGAGCAGCTC
CCGATGATCC TCGGCACCGA CGCCGCCGGG ACCACCCCGG ACGGCCGCCC CGTGGTGGTG
CACGCCGTCG TCGGCGCCGA CGGGCACGGC GTGGGCCCCG ACGAGACGCG CACCCTGCTG
TCGGAGAAGT ACCCCGGGAC CCTCGCCGAG CAGGTGAGCG TCCCCACGCA CAACCTCGTC
CCGCTGCCCG ACGGTCTGTC CTTCGAGGAG GCCGCGTGCG TCCCGACGGC GTGGCTCACC
GCCTATCGCA TGCTGTTCCG GTCGGCAGGC CTGACCCCGG GCCAGAGCGT GCTCGTCCAG
GGCGCCGGAG GTGGCCTGTC GACGGCTGCG GTCACGCTCG CCGCCGCGGC GGGCATCGAG
GTCTTCGTCA CCAGCCGGTC CGCCGAGAAG CGCGCCGCCG CGACCGCGCT CGGGGCCACC
CACGCCCTCG AGAGCGGCGC ACGCCTCCCG CACCGCGTCG ACGCGGTGGT CGAGTCGGTC
GGCGCCGCGA CCTGGTCGCA CTCGATCCGC TCGGTGCGCC CGGGCGGGAC CGTCGTGGTC
GCCGGCGCGA CCTCCGGCGA CCCCACCGCG GCCGAGCTCA CCCGCATCTT CTTCCAGGAG
ATCACGGTGC GCGGCGTGAC CATGGGCACC CGCGACGAGC TGTCCGACCT GCTGTCCTTC
ATGGTGCGCG CCGGGCTGCG GCCGACCGTC GACAGCCGGT ACCCGCTCGC GCAGGCCCGC
GACGCGGTCG CCCGCCTCGC CGGGGGCGAG CACGTCGGCA AGGTGGTCCT GGTGCCATGA
 
Protein sequence
MLAATVARFS PDSPVDALEV GERPEPAERE AWTTVDVRAA SLNHHDLWSL RGVGLREEQL 
PMILGTDAAG TTPDGRPVVV HAVVGADGHG VGPDETRTLL SEKYPGTLAE QVSVPTHNLV
PLPDGLSFEE AACVPTAWLT AYRMLFRSAG LTPGQSVLVQ GAGGGLSTAA VTLAAAAGIE
VFVTSRSAEK RAAATALGAT HALESGARLP HRVDAVVESV GAATWSHSIR SVRPGGTVVV
AGATSGDPTA AELTRIFFQE ITVRGVTMGT RDELSDLLSF MVRAGLRPTV DSRYPLAQAR
DAVARLAGGE HVGKVVLVP