Gene Sked_32170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32170 
Symbol 
ID8634850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3581231 
End bp3582601 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content75% 
IMG OID 
Producthomoserine O-acetyltransferase 
Protein accessionYP_003315947 
Protein GI269796492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.449687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.548604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCCCGGCGCC CCGACCGCAC GGCACGCACC GCTCAGGAGC GACCGTGGAC 
ACCCCCGTGC AGGGCGCCGG GACCTCCGTA CAGTGGACGA CGATGAGCGA CGAGCAGCAG
CGTCCGGAGG ACCGGGCCGA CGACAGCGAC CGCGGCGGCG CGCGCCCCGG ACCACGCTGG
CACCGCACGA GTCCCTCGCG TGCGCAGTCC CGCCGGCTCG AGCCCTCGAC CTTCCGCGCG
AGCGGCGCCT GGCGCCCCGG CGACCCCGTC GGCGACCGGC GCTTCGTCGA CGTCGGCGCC
CTCGACCTCG AGGGCGGCGA CCAGCTCCCC TCGGTCCAGG TGGCCTACGA GACGTGGGGC
ACCCTCAACG CCGCCCGCGA CAACGCCGTC CTCGTGCTGC ACGCCCTCAC CGGCGACAGC
CACGTGACCG GCGAGGCCGG CCCCGGGCAC CCGACCGCAG GCTGGTGGAC GCAGATGGTC
GGCCCCGGCG CGCCGATCGA CACCGACCGC TACTACGTGG TCGCCCCGAA CGTCGTCGGC
GGCTGCCAGG GCACCACCGG GCCGTCGAGC ACCGCCCCCG ACGGGGCACC GTGGGGCAGC
GCCTTCCCCA TGGTCACCGT CCGCGACCAG GTGGCCGCCG AGATCGAGCT GTCCAAGGCG
CTCGGCATCA CCTCGTGGAC CCTCGTGGTC GGCGCCTCGA TGGGCGGGCT GCGCGCCCTC
GAGTGGACGC TGCTGGGCCC CGAGGCCGGC ATCGAGGTCG AGTCCGCCGC GATCATCGCC
TCCGCCGCCC AGACCCCCGG CGACCAGATC GCCTGGGCGC ACCCGCAGCT CACCGCCATC
CACGCCGACC CGCGGTTCCG CGGCGGCGAC TACTACGACG CTGCCGACGG CGACGGCCCC
CACGTGGGCC TCGGCGTCGC GCGGTCGATC GCGCACACCA CCTACCGCAG CGCCGTGGAG
TTCGACGAGC GCTTCGGCCG CATCCCGCAG GGCGGCGACG ACCCCATGCG GGGCGGCCGG
TTCGCGGTGC AGTCGTACCT CGACCACCAC GCGTCCAAGC TGGCCAGGCG CTTCGACGCC
AACAGCTACG TGGTGCTCAC CGAGTCGATG CTCACCCACG ACCTCGGCCG CGACCGTGGC
GGTGTCACCA CGGCGCTGCA GTCCGTCCGG TCACGCGTGC TCGTGGTCGG CGTCGACACG
GACCGGCTGT TCCTGCCGGC CGAGTCCGAG CGCATCGCCC GCTGGGTGCC GGGCGCAGAA
CCGGTGCGGC TGCTGCGCTC CGCCTACGGG CACGACGGGT TCCTCATCGA GTTCGACCAG
CTGGGGCCGA TCGTCGGGGA GTTCCTCGCA GGGGCGCGGC ACCACCGCTG A
 
Protein sequence
MTETPAPRPH GTHRSGATVD TPVQGAGTSV QWTTMSDEQQ RPEDRADDSD RGGARPGPRW 
HRTSPSRAQS RRLEPSTFRA SGAWRPGDPV GDRRFVDVGA LDLEGGDQLP SVQVAYETWG
TLNAARDNAV LVLHALTGDS HVTGEAGPGH PTAGWWTQMV GPGAPIDTDR YYVVAPNVVG
GCQGTTGPSS TAPDGAPWGS AFPMVTVRDQ VAAEIELSKA LGITSWTLVV GASMGGLRAL
EWTLLGPEAG IEVESAAIIA SAAQTPGDQI AWAHPQLTAI HADPRFRGGD YYDAADGDGP
HVGLGVARSI AHTTYRSAVE FDERFGRIPQ GGDDPMRGGR FAVQSYLDHH ASKLARRFDA
NSYVVLTESM LTHDLGRDRG GVTTALQSVR SRVLVVGVDT DRLFLPAESE RIARWVPGAE
PVRLLRSAYG HDGFLIEFDQ LGPIVGEFLA GARHHR