| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_32160 |
|---|
| Symbol | |
|---|
| ID | 8634849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3579868 |
|---|
| End bp | 3581223 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | O-acetylhomoserine sulfhydrolase |
|---|
| Protein accession | YP_003315946 |
|---|
| Protein GI | 269796491 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0440182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.715375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC CCAGCTGGTC CTTCGAGACC CGTCAGATCC ACGCCGGACA GGCGCCCGAC
CCCACCACCG GGGCTCGCGC GCTGCCGATC TACCAGACCA CCTCCTTCGT GTTCCCCGAC
GCCGGCGTCG CCGCCGACCG CTTCGCGCTC AAGGACCTCG GCCCCATCTA CACGCGCATC
GGCAACCCGA CGCAGGAGGC CGTGGAGGCC CGCATCGCCG ACCTCGAGGG CGGCGTCGGC
GCGCTGCTGC TGTCCTCCGG GCAGGCCGCC ACGACCTTCG CGATCCTCAA CGTCGCCGAG
GCCGGCGACC ACGTCGTCGC CAGCCCCTCG CTCTACGGCG GCACCTACAA CCTGCTCCAG
AACACCCTGC GCAAGCTCGG CGTGACCACC ACCTTCGTCA CCGACCCGCA CGACCCGCAG
GCGTGGCGCG ACGCCGTGCA GCCGAACACC AAGGCCTTCT TCGGCGAGAC CATCCCGAAC
CCGCAGGCCG ACATCCTCGA CATCGAGGCC GTCGCCGCCG TGGCCCACGA GGTCGGCGTG
CCGCTCATCG TCGACAACAC CGTCGCGACG CCCTACCTGC TGCGACCGAT CGAGTTCGGC
GCGGACGTCG TCATCCACTC GGCGACCAAG TACCTCGGCG GCCACGGCTC GGCCATCGGC
GGCGTGATCG TGGACTCCGG CAACTTCGAC TTCGCGAAGG ACCCCGAGCG CTTCCCGGGC
TTCAACACCC CCGACCCCAG CTACGACGGG CTCGTGTACG CCCGCGACCT CGGCGTCGAC
GGCATCCTCG GGGCGAACCT CGCGTACGTG CTCAAGGCCC GTGTCCAGCT GCTGCGCGAC
CTCGGCTCCG CGATCTCGCC CTTCAACGCC TTCCTCATCG CGCAGGGCAT CGAGACGCTC
TCGCTGCGGG TCGAGCGCCA CGTGTCCAAC GCCGCGACCG TCGCCGCCTG GCTCGAGGCC
CGCGACGACG TGGCACGCGT CCACTACGCC GGCCTCGAGT CGAGCCCCTG GCACGCGAAC
GCGCTCAAGT ACACGCCACG CGGTGCGGGC GCGATCGTCG CCTTCGAGAT CGAGGGCGGC
TCCCCCGCCG GGCAGGCCTT CGTCTCCGCG CTCGAGCTCC ACTCGAACGT CGCCAACATC
GGCGACGTCC GCTCGCTCGT CATCCACCCG GCGTCGACCA CGCACAGCCA GCTGACGCCC
GAGGAGCAGG CCGCGTCGGG CGTCACCCCA GGGCTGGTCC GGCTCAGCGT CGGCATCGAG
CACGTGGACG ACATCCTCGC CGACCTCGAG GCCGGCTTCA CCGCCGCCAA GGGTGCGGTC
GAGGGCTCCA CGGCCCCTGC CGCGCAGGAC GCGTGA
|
|---|
| Protein sequence | MTPPSWSFET RQIHAGQAPD PTTGARALPI YQTTSFVFPD AGVAADRFAL KDLGPIYTRI
GNPTQEAVEA RIADLEGGVG ALLLSSGQAA TTFAILNVAE AGDHVVASPS LYGGTYNLLQ
NTLRKLGVTT TFVTDPHDPQ AWRDAVQPNT KAFFGETIPN PQADILDIEA VAAVAHEVGV
PLIVDNTVAT PYLLRPIEFG ADVVIHSATK YLGGHGSAIG GVIVDSGNFD FAKDPERFPG
FNTPDPSYDG LVYARDLGVD GILGANLAYV LKARVQLLRD LGSAISPFNA FLIAQGIETL
SLRVERHVSN AATVAAWLEA RDDVARVHYA GLESSPWHAN ALKYTPRGAG AIVAFEIEGG
SPAGQAFVSA LELHSNVANI GDVRSLVIHP ASTTHSQLTP EEQAASGVTP GLVRLSVGIE
HVDDILADLE AGFTAAKGAV EGSTAPAAQD A
|
|---|
| |