Gene Sked_32100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32100 
Symbol 
ID8634843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3572853 
End bp3573407 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_003315940 
Protein GI269796485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.918593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATCTG CCCAGGCTGG CGACATCCAT CACATCCTGC TCAGCGAGGA GGAGATCGCG 
GCGAAGCTCG ACGAGCTCGC GCTGCGCATC GACGCCGACT ACGCGGGCAA GGACCTGCTC
CTCGTGGGTG TCCTCAAGGG CGCCGTCATG GTCATGGCCG ACCTCTCGCG CCGCATCGAG
CACCAGGGCG TCGAGATGGA CTGGATGGCC GTCTCGTCCT ACGGCTCGGG CACCAAGTCC
TCGGGCGTCG TGCGCATCCT CAAGGACCTC GACGCGGACC TCTCGGGCCG CCACGTGCTC
ATCGTCGAGG ACATCATCGA CTCCGGCCTG ACGCTCTCCT GGCTCATCTC CAACCTGCGC
AGCCGCGGCC CGGCCTCGGT CGAGGTCGCC GCGATGCTCC GCAAGCCCGA CGCCGCGAAG
GTCGAGGTCG ACGTGCGCTA CGTGGGCTTC GACATCCCCA ACGAGTTCGT GGTCGGCTAC
GGCCTCGACT ACGCCGAGAA GTACCGCACG CTGCCCTTCG TCGGCACGCT CGCGCCGCAC
GTCTACGAGA GCTGA
 
Protein sequence
MGSAQAGDIH HILLSEEEIA AKLDELALRI DADYAGKDLL LVGVLKGAVM VMADLSRRIE 
HQGVEMDWMA VSSYGSGTKS SGVVRILKDL DADLSGRHVL IVEDIIDSGL TLSWLISNLR
SRGPASVEVA AMLRKPDAAK VEVDVRYVGF DIPNEFVVGY GLDYAEKYRT LPFVGTLAPH
VYES