Gene Sked_32000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32000 
Symbol 
ID8634833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3560288 
End bp3560743 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content69% 
IMG OID 
ProductL-aspartate 1-decarboxylase 
Protein accessionYP_003315930 
Protein GI269796475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCCC TGCAGCGTCC GATGATGATC GGCAAGATCC ACCGCGCGAC GGTGACCCAG 
GCCGACCTGC ACTACGTCGG CTCGATCACG GTCGACAACC TGCTGCTCGA GGCCGCAGAC
CTGTACCCGG GCCAGCAGGT CGACGTCGTC GACGTGACCA ACGGGTCGCG GCTGACCACC
TACGTGATCC CGGGTGAGCC CGGCTCCGGT CAGGTCTGCA TCAACGGCGC CGCGGCGCAC
CACGTGCACC CCGGCGACAC GGTGATCATC ATCGCCTACG GCATGCTGGC CGACGCCGAG
GCCCGCCACT ACCTGCCGCA CGTCGTGTTC GTCGACGGCG ACAACGCCGT GGTCGAGGTC
TCGGAGGAGC CGGGTCTCGT CCCCGAGGGC TACGACCTCG AGCCGAGCGG TCTCGCGATC
GCGCCGTTCC AGCAGCAGCA CGGCACCGAG GCGTGA
 
Protein sequence
MTSLQRPMMI GKIHRATVTQ ADLHYVGSIT VDNLLLEAAD LYPGQQVDVV DVTNGSRLTT 
YVIPGEPGSG QVCINGAAAH HVHPGDTVII IAYGMLADAE ARHYLPHVVF VDGDNAVVEV
SEEPGLVPEG YDLEPSGLAI APFQQQHGTE A