| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_31980 |
|---|
| Symbol | |
|---|
| ID | 8634831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3557561 |
|---|
| End bp | 3558520 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | nicotinate-nucleotide pyrophosphorylase (carboxylating) |
|---|
| Protein accession | YP_003315928 |
|---|
| Protein GI | 269796473 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGTGA CTCACCCCTC CGCGCCCGCT GCCCAGACCG AGCCCTCCGT CAGGTCCTCT
GCTGAGACCA CCGTCGAGCC GGGCCTCGAC CCCGCCTGGA TCAGCGACAC CGTGCGCCGC
ACCCTCAGCG AGGACCTCGG GGGAGACCCC GGGCGCGACG TCACGAGCCA GGCGACGATC
GCCGTCTCGT CGGGCGCCGT CGCGCACCTC GTGGCGCGTC AGGAGGGTGT CGTGGCGGGC
CTCGTGCTCG TGCAGGAGGT CGTCGACCAG GTGTCGGCGC GCTTCGGGCT CGGACCGGTG
CGCGTGGACC TGGACGTCGT CGACGGGACG CGGGTCGAGC CCGGTCGCCG GCTCGCGGTG
CTCACCGGGC CCGTGCAGGT GCTGCTCATG GCGGAGCGGT CGCTGCTCAA CCTCGCCAGC
CGTGCCTCGG GCGTCGCGAC CGCGACCCGC GCCTGGGCGG ACAGGCTCGA GGGGACGCAG
GCCACGGTCC TCGACACCCG CAAGACCACG CCTGGGCTCC GCGCGCTCGA GAAGTACGCC
GTGCGGGCCG GCGGCGGGAC CAACAAGCGC ATGGGCCTCT ACGACGTCGC GATGGTCAAG
GACAACCACG TGGTCGCCGC CGGCTCCGTG ACCGCTGCGG TGCACGCGGT CCGTGAGGCC
TTCCCGGAGG TGCTCGTCCA GGTGGAGGCC GACACCTGCG CGCAGGCGCT CGAGGCGGTC
GCGGCAGGTG CGACCTTCCT GCTGCTCGAC AACATGAGCA CGCCCACCCT CACCGAGACC
GTCGCCGCGG TCCGGGCCGG CGAGGGGCAG ACCGGTCCCG TCGAGCTTGA GGCCACCGGG
AACCTCACGC TGGACCGTGC CGCCGAGGTC GCAGCGACGG GCGTCGACTA CATGTCGGTC
GGTGCGCTGA CCCACTCGGC GCCGATCCTG GACCTCGCGC TCGACCTCGT CTCGCGCTGA
|
|---|
| Protein sequence | MGVTHPSAPA AQTEPSVRSS AETTVEPGLD PAWISDTVRR TLSEDLGGDP GRDVTSQATI
AVSSGAVAHL VARQEGVVAG LVLVQEVVDQ VSARFGLGPV RVDLDVVDGT RVEPGRRLAV
LTGPVQVLLM AERSLLNLAS RASGVATATR AWADRLEGTQ ATVLDTRKTT PGLRALEKYA
VRAGGGTNKR MGLYDVAMVK DNHVVAAGSV TAAVHAVREA FPEVLVQVEA DTCAQALEAV
AAGATFLLLD NMSTPTLTET VAAVRAGEGQ TGPVELEATG NLTLDRAAEV AATGVDYMSV
GALTHSAPIL DLALDLVSR
|
|---|
| |