Gene Sked_31970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31970 
Symbol 
ID8634830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3555901 
End bp3557433 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content69% 
IMG OID 
Productlysyl-tRNA synthetase (class II) 
Protein accessionYP_003315927 
Protein GI269796472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTCTG AGCAGACCCC CGCGACCGCA GACCCCACTC TCGCCGACGG GGAGAACGAC 
CTCCCCGAGC AGCTGCGGGT GCGTCGGGAG AAGCGCGACC GGCTGCTCGA GAGCGGCGTC
GAGGCCTACC CGGTCGAGGT GCCCCGCACG CACTCGATCG CCGAGGTCCG CGCGCAGTAC
GCGCACCTCG AGACGGGCGA GGAGACCGAC GACCTCGTCG GCGTCGCCGG TCGTGTCGTG
TTCCTGCGCA ACTCCGGCAA GCTCTGCTTC GTCTCGCTCC AGGACGGCGA GGGCAACCGC
CTCCAGATCA TGCTGAGCCT CGCGGTCGTC GGCGAGGAGT CGCTCGCCGC GTTCAAGGCA
GACGTCGACC TCGGTGACCA CCTCTTCGCG CACGGTCGCG TGGGCAGCTC GCGCCGCGGC
GAGCTGAGCG TCTTCGCGGA CTCGTGGCAG ATCGCCGCGA AGGCGCTCCG CCCCCTCCCG
GTGCTCCACC GTGAGCTCTC GGAGGAGGCC CGCGTCCGTC AGCGCTACGT GGACCTCATC
GCGCGCCCGG CGGCCCGCGA GGCGGCGCGC CTGCGCGCCG GCGTGGTCCG GTCCCTGCGC
GAGAACTTCC ACGACCGCGG GTACATGGAG ATCGAGACCC CGATGCTCCA GACCATCCAC
GGCGGTGCGG CCGCCCGGCC TTTCACCACG CACATGAATG CTTTCGACAT CGACCTGTTC
CTGCGGATCG CCCCCGAGCT GTTCCTCAAG AGGGCCGTGG TCGGCGGTAT CGAGCGCGTC
TTCGAGATCA ACCGCAACTT CCGGAACGAG GGTGCTGACT CCACGCACTC CCCGGAGTTC
GCGATGCTCG AGGCCTACGA GGCATATGGC GACTACAACT CCATGGCGGT GCTCACCAAG
AATCTTGTCC AGAAGGCGGC TCTCGACATG TTCGGGACCA CTCTCGTGAC GCTCGCCTCG
GGCGAGGAGT ACGAGCTCGG CGGCGACTGG GCCGAGCTCA CCATGTACGG GTCGTTGTCG
GAGGCCCTCG GCGAGGAGAT CACCCCGCAG ACCACCGTCG CGCGGCTCAC GGAGCTCGCG
GACGCCGTCG AGATCTCGAT CGACCCGAAG AAGGTCAACC ACGGAAAGCT CGTCGAAGAG
CTCTGGGAGC ACCACGTCGG CAATTCTCTC TACGCGCCGA CCTTCGTCCG GGACTTCCCC
GTCGAGACCT CGCCGTTGAC GCGCGACCAC CGCTCTGTCC CCGGGCAGGT CGAGAAGTGG
GACCTGTACG TCCGTGGTTT CGAGCTCGCG ACCGCGTACT CCGAGCTGGT GGACCCGGTC
GTCCAGCGCC AGCGCTTCGA GGCGCAGGCG GTCCTCGCAG CTGCGGGCGA CGACGAGGCG
ATGGTGCTCG ACGAGGACTT CCTCACGGCG ATGGAGTACG CGATGCCGCC GAGCGGGGGC
ATGGGGATGG GCCTCGACCG CCTGCTCATG GCGCTGACGG GTCTGGGGAT CCGCGAGACG
ATCCTGTTCC CGCTGGTCAA GCCGCAGCGT TGA
 
Protein sequence
MTSEQTPATA DPTLADGEND LPEQLRVRRE KRDRLLESGV EAYPVEVPRT HSIAEVRAQY 
AHLETGEETD DLVGVAGRVV FLRNSGKLCF VSLQDGEGNR LQIMLSLAVV GEESLAAFKA
DVDLGDHLFA HGRVGSSRRG ELSVFADSWQ IAAKALRPLP VLHRELSEEA RVRQRYVDLI
ARPAAREAAR LRAGVVRSLR ENFHDRGYME IETPMLQTIH GGAAARPFTT HMNAFDIDLF
LRIAPELFLK RAVVGGIERV FEINRNFRNE GADSTHSPEF AMLEAYEAYG DYNSMAVLTK
NLVQKAALDM FGTTLVTLAS GEEYELGGDW AELTMYGSLS EALGEEITPQ TTVARLTELA
DAVEISIDPK KVNHGKLVEE LWEHHVGNSL YAPTFVRDFP VETSPLTRDH RSVPGQVEKW
DLYVRGFELA TAYSELVDPV VQRQRFEAQA VLAAAGDDEA MVLDEDFLTA MEYAMPPSGG
MGMGLDRLLM ALTGLGIRET ILFPLVKPQR