Gene Sked_31940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31940 
Symbol 
ID8634827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3554037 
End bp3555143 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content75% 
IMG OID 
Product3-carboxymuconate cyclase 
Protein accessionYP_003315924 
Protein GI269796469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAC CTCCCGCACC GCTGCAGCGT CTCCTCGTCG GCACCTACCC CACCTCGGGC 
GGCCCAGGGT CGGGGGAGGG GATCTGGTCC GTCGACCTCG ACCCGCGCAC CGGGGAGCTC
TCGGGCGCCC ACCAGCTGGT CGAGGTCGCG TCACCGTCCT TCCTCGCGCT GCACCCCGAC
GGGACGACCG TGGTCGCCGT CTCCGAGACG GAGCAGGGGC GGGTGAGCAC CTTCTCGCTG
TCCGGGGACG GGCTGGTCCT CACCTCGAGC GCGTCGACGG GCGGCGCTGA CCCGTGCCAC
CTCGTGGTGG ACGAGCGCGA CGTGTGGGTG GCGAACTACT CCTCCGGCAG CCTGGCGGCC
CTGACGCTCA CGGAGTCGGG CACCCTGGGC GGAGCCCTCG CGACCTTCGC GCACAGCGGC
TCGGGCCCGG TGCGCGAGCG CCAGCGCGGT CCCCACGCGC ACTACGTCCA GGCGGTCGGA
GAGCGCCACC TGTGGGTCAG CGACCTCGGG ACGGACGAGG TCCGCCGGTA CCGCAGGACT
GCGACGCCCG GTGTGCTCGT CGCCGACGGC CTCGCCCTCG CGCTGCCGCC CGGGACCGGC
CCGCGGCACG TGGCGCTCGG CGACGACGGG ACGGCCTTCG TGGTGGGCGA GCTCGACTCC
CGCGTCCACG TGGTCCGGGT CGAGCAGGAC GGGTCCGCGA CGCATCTCGG GAGCGTGCCC
GCCTGCGACA CCCCCAGCCC CGAGGCGGGG TCCTTCCCCT CGCACCTGGC ACTGAGCGCC
GACGGCAGCC GCCTCTACGT CGGGGTCCGC GGTCCCGACG TGCTCGCGAC CTTCGCGGTC
GAGCGCGACG ACGAGGGCCA GCCCGTCCTG CGCCACCTCG CGGACTCACC CCTGGGCGTC
GTGTGGCCAC GTCACCTCGC GGTGCTGACG GCGCACGCGG CCGACCCCAC GCTCTCCGGG
CGCCCCGCAC AGGCCGACGA CCTGGTGGTC GTCGCAGGCC AGACCTCCGG CGGTGTCACG
GTCCTGCGCG TCGACCACGA GAGCGGTCAG GCGGAGCCGG TCTCGTCCGT CGACATCCCC
GCGCCGGCCT GCATCCTGCC GGTCTGA
 
Protein sequence
MTTPPAPLQR LLVGTYPTSG GPGSGEGIWS VDLDPRTGEL SGAHQLVEVA SPSFLALHPD 
GTTVVAVSET EQGRVSTFSL SGDGLVLTSS ASTGGADPCH LVVDERDVWV ANYSSGSLAA
LTLTESGTLG GALATFAHSG SGPVRERQRG PHAHYVQAVG ERHLWVSDLG TDEVRRYRRT
ATPGVLVADG LALALPPGTG PRHVALGDDG TAFVVGELDS RVHVVRVEQD GSATHLGSVP
ACDTPSPEAG SFPSHLALSA DGSRLYVGVR GPDVLATFAV ERDDEGQPVL RHLADSPLGV
VWPRHLAVLT AHAADPTLSG RPAQADDLVV VAGQTSGGVT VLRVDHESGQ AEPVSSVDIP
APACILPV