Gene Sked_31800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31800 
Symbol 
ID8634813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3541214 
End bp3541717 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content78% 
IMG OID 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_003315910 
Protein GI269796455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CGCACCCCGT CCCGCTCCCG CGCGTCGGCA CGGGCACGGA CGTGCACGCC 
TTCGCCGACC CTGCCGACGG GCGCGAGCTC TGGGTGGCCG GGCTGCACTG GCCGGGGGAG
AACGGCCTCG CGGGGCACTC CGACGCCGAC GTCGTCGCGC ACGCCGCGGC CGACGCCATC
TTCTCCGCGA CCGGCCTGGG CGACCTCGGG TCGAACTTCG GGACGAGCGC CCCGGAGTGG
GCCGGTGCGA GCGGCGCCGT GCTGCTCGCG GAGGCCGCGT CGCGGGCCCG GGCGGCCGGG
TTCCGCATCG GCAACGTCGC GGTCCAGCTC GTCGGCAACC GGCCCCGTCT CGGGACGCGG
CGCGCGGAGG CCGAGCGCGT CCTCAGCGAC GCCGCCGGGG CGCCGGTCAC CGTCACCGCC
ACGACGACCG ACGGCCTCGG CCTCACCGGC CGCGGAGAGG GCGTCGCAGC CCTCGCGACG
GCGATCGTGG TCCACGAGGG CTGA
 
Protein sequence
MSSTHPVPLP RVGTGTDVHA FADPADGREL WVAGLHWPGE NGLAGHSDAD VVAHAAADAI 
FSATGLGDLG SNFGTSAPEW AGASGAVLLA EAASRARAAG FRIGNVAVQL VGNRPRLGTR
RAEAERVLSD AAGAPVTVTA TTTDGLGLTG RGEGVAALAT AIVVHEG